• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

欧洲扁蛎(Ostrea edulis (L.))中(GA/TC)n和(AC/GT)n重复序列的鉴定与遗传特性

Identification and inheritance of (GA/TC)n and (AC/GT)n repeats in the European flat oyster Ostrea edulis (L.).

作者信息

Naciri Y, Vigouroux Y, Dallas J, Desmarais E, Delsert C, Bonhomme F

机构信息

IFREMER Unité de Recherche en Génétique et Ecloserie, La Tremblade, France.

出版信息

Mol Mar Biol Biotechnol. 1995 Mar;4(1):83-9.

PMID:7749469
Abstract

Twelve microsatellites were isolated from a partial genomic library of Ostrea edulis using (GA/TC)n and (AC/GT)n probes and were subsequently sequenced. We estimate that, on average, 12,700 (GA/TC)n and 3900 (AC/GT)n microsatellites could be found in the genome assuming a random distribution. These estimates are high enough for the construction of a saturated genetic map. Primers were designed for three microsatellite loci, and analyses of polymorphism in a wild cohort revealed that one was suitable for population genetics studies (5 alleles), while the other two were highly polymorphic (between 17 and 48 alleles) and thus were more useful for paternity testing. Mendelian inheritance was tested on two full-sib families, and significant distortions of genotypic frequencies were found, although the gametic distributions seemed to be in agreement with Mendelian expectations. We interpret this as evidence for zygotic selection.

摘要

使用(GA/TC)n和(AC/GT)n探针从食用牡蛎的部分基因组文库中分离出12个微卫星,随后对其进行测序。我们估计,假设随机分布,基因组中平均可发现12700个(GA/TC)n微卫星和3900个(AC/GT)n微卫星。这些估计值足以构建饱和遗传图谱。为三个微卫星位点设计了引物,对一个野生群体的多态性分析表明,一个适用于群体遗传学研究(5个等位基因),而另外两个具有高度多态性(17至48个等位基因),因此更适用于亲子鉴定。在两个全同胞家系中测试了孟德尔遗传,发现基因型频率存在显著偏差,尽管配子分布似乎符合孟德尔预期。我们将此解释为合子选择的证据。

相似文献

1
Identification and inheritance of (GA/TC)n and (AC/GT)n repeats in the European flat oyster Ostrea edulis (L.).欧洲扁蛎(Ostrea edulis (L.))中(GA/TC)n和(AC/GT)n重复序列的鉴定与遗传特性
Mol Mar Biol Biotechnol. 1995 Mar;4(1):83-9.
2
Microsatellite marker development and analysis in the eastern oyster (Crassostrea virginica): confirmation of null alleles and non-Mendelian segregation ratios.美洲牡蛎(Crassostrea virginica)微卫星标记的开发与分析:无效等位基因及非孟德尔分离比例的确认
J Hered. 2004 Jul-Aug;95(4):346-52. doi: 10.1093/jhered/esh058.
3
RAPD identification of microsatellites in Daphnia.大型溞微卫星的随机扩增多态性DNA鉴定
Mol Ecol. 1996 Jun;5(3):437-41.
4
Assignment of 30 microsatellite loci to the linkage map of Arabidopsis.将30个微卫星基因座定位到拟南芥的连锁图谱上。
Genomics. 1994 Jan 1;19(1):137-44. doi: 10.1006/geno.1994.1023.
5
Porcine (GT)n sequences: structure and association with dispersed and tandem repeats.猪(GT)n序列:结构及其与分散重复序列和串联重复序列的关联
Genomics. 1994 May 1;21(1):63-70. doi: 10.1006/geno.1994.1225.
6
Reduced female gene flow in the European flat oyster Ostrea edulis.欧洲扁牡蛎(Ostrea edulis)中雌性基因流动减少。
J Hered. 2004 Nov-Dec;95(6):510-6. doi: 10.1093/jhered/esh073.
7
Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serrandidae).海鲈(欧洲鲈,Dicentrarchus labrax (Linnaeus, 1758))(鲈形目:锯盖鱼科)微卫星标记的开发与应用
Mol Mar Biol Biotechnol. 1995 Mar;4(1):62-8.
8
Direct typing of polymorphic microsatellites in the colonial tunicate Botryllus schlosseri (ASCIDIACEA).对群体被囊动物博氏菊海鞘(海鞘纲)中多态微卫星进行直接分型
Biochem Biophys Res Commun. 1994 Aug 30;203(1):646-51. doi: 10.1006/bbrc.1994.2231.
9
Parentage testing and linkage analysis in the horse using a set of highly polymorphic microsatellites.利用一组高度多态性微卫星对马匹进行亲子鉴定和连锁分析。
Anim Genet. 1994 Feb;25(1):19-23.
10
Exploiting EST databases for the development and characterization of EST-SSRs in the Pacific oyster (Crassostrea gigas).利用EST数据库开发和鉴定太平洋牡蛎(Crassostrea gigas)中的EST-SSR
J Hered. 2008 Mar-Apr;99(2):208-14. doi: 10.1093/jhered/esm124. Epub 2008 Jan 30.

引用本文的文献

1
Seascape genomics of eastern oyster () along the Atlantic coast of Canada.加拿大东海岸东部牡蛎()的海景基因组学。
Evol Appl. 2018 Dec 26;12(3):587-609. doi: 10.1111/eva.12741. eCollection 2019 Mar.
2
Genetic mapping and QTL analysis of growth-related traits in Pinctada fucata using restriction-site associated DNA sequencing.利用限制性位点关联DNA测序技术对合浦珠母贝生长相关性状进行遗传图谱构建和QTL分析
PLoS One. 2014 Nov 4;9(11):e111707. doi: 10.1371/journal.pone.0111707. eCollection 2014.
3
Spatial genetic features of eastern oysters (Crassostrea virginica Gmelin) in the Gulf of Mexico: northward movement of a secondary contact zone.
墨西哥湾东方牡蛎(Crassostrea virginica Gmelin)的空间遗传特征:二次接触带的北移。
Ecol Evol. 2014 May;4(9):1671-85. doi: 10.1002/ece3.1064. Epub 2014 Apr 10.
4
Centromere localization for Bighead Carp (Aristichthys nobilis) through half-tetrad analysis in diploid gynogenetic families.通过二倍体雌核发育家系的半四分体分析对大头鲤(Aristichthys nobilis)着丝粒定位。
PLoS One. 2013 Dec 20;8(12):e82950. doi: 10.1371/journal.pone.0082950. eCollection 2013.
5
Combining two-stage testing and interval mapping strategies to detect QTL for resistance to bonamiosis in the european flat oyster Ostrea edulis.结合两阶段测试和区间定位策略检测欧洲平牡蛎(Ostrea edulis)对博纳姆病抗性的数量性状基因座。
Mar Biotechnol (NY). 2009 Sep-Oct;11(5):570-84. doi: 10.1007/s10126-008-9173-y. Epub 2009 Jan 14.
6
Development and characterization of EST-SSR markers in the eastern oyster Crassostrea virginica.美洲牡蛎(Crassostrea virginica)EST-SSR标记的开发与特征分析
Mar Biotechnol (NY). 2007 Jul-Aug;9(4):500-11. doi: 10.1007/s10126-007-9011-7. Epub 2007 Jun 9.
7
Segregation and linkage analysis of 75 novel microsatellite DNA markers in pair crosses of Japanese abalone (Haliotis discus hannai) using the 5'-tailed primer method.利用5'-尾引物法对日本盘鲍(Haliotis discus hannai)成对杂交中的75个新型微卫星DNA标记进行分离和连锁分析。
Mar Biotechnol (NY). 2006 Sep-Oct;8(5):453-66. doi: 10.1007/s10126-005-6179-6. Epub 2006 Jul 27.
8
Genetic variation in wild and hatchery stocks of Suminoe Oyster (Crassostrea ariakensis) assessed by PCR-RFLP and microsatellite markers.通过PCR-RFLP和微卫星标记评估滑顶薄壳鸟蛤(Crassostrea ariakensis)野生种群和养殖种群的遗传变异。
Mar Biotechnol (NY). 2005 Nov-Dec;7(6):588-99. doi: 10.1007/s10126-004-5105-7. Epub 2005 Jul 14.
9
High frequency and large number of polymorphic microsatellites in cultured shrimp, Penaeus (Litopenaeus) vannamei [Crustacea:Decapoda].养殖凡纳滨对虾(南美白对虾)[甲壳纲:十足目]中高频且大量的多态微卫星
Mar Biotechnol (NY). 2003 Jul-Aug;5(4):311-30. doi: 10.1007/s10126-002-0092-z.
10
Early effect of inbreeding as revealed by microsatellite analyses on Ostrea edulis larvae.通过微卫星分析揭示的近亲繁殖对食用牡蛎幼虫的早期影响。
Genetics. 1998 Apr;148(4):1893-906. doi: 10.1093/genetics/148.4.1893.