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粗糙脉孢菌全局氮调节蛋白NIT2的DNA结合位点特异性:对突变结合位点的分析

DNA binding site specificity of the Neurospora global nitrogen regulatory protein NIT2: analysis with mutated binding sites.

作者信息

Chiang T Y, Rai R, Cooper T G, Marzluf G A

机构信息

Department of Biochemistry, Ohio State University, Columbus 43210.

出版信息

Mol Gen Genet. 1994 Nov 15;245(4):512-6. doi: 10.1007/BF00302264.

DOI:10.1007/BF00302264
PMID:7808401
Abstract

NIT2, a positive-acting regulatory protein in Neurospora crassa, activates the expression of a series of unlinked structural genes that encode nitrogen catabolic enzymes. NIT2 binding sites in the promoter regions of nit3, alc and lao have at least two GATA sequence elements. We have examined the binding affinity of the NIT2 protein for the yeast DAL5 wild-type upstream activation sequence UASNTR, which contains two GATA elements, and for a series of mutated binding sites, each differing from the wild-type site by a single base. Substitution for individual nucleotides within 5' or 3' sequences that flank the GATA elements had only modest effects upon NIT2 binding. In contrast, nearly all substitutions within the GATA elements almost completely eliminated NIT2 binding, demonstrating the importance of the GATA sequence for NIT2 binding. Four high-affinity binding sites for the NIT2 protein were found within a central region of the nit-2 gene itself.

摘要

NIT2是粗糙脉孢菌中的一种正向作用调节蛋白,它可激活一系列不连锁的结构基因的表达,这些基因编码氮分解代谢酶。nit3、alc和lao启动子区域中的NIT2结合位点至少有两个GATA序列元件。我们检测了NIT2蛋白与酵母DAL5野生型上游激活序列UASNTR(其含有两个GATA元件)以及一系列突变结合位点的结合亲和力,每个突变结合位点与野生型位点仅相差一个碱基。GATA元件两侧5'或3'序列内单个核苷酸的替换对NIT2结合只有适度影响。相比之下,GATA元件内几乎所有的替换几乎完全消除了NIT2结合,这表明GATA序列对NIT2结合的重要性。在nit-2基因自身的一个中央区域内发现了四个NIT2蛋白的高亲和力结合位点。

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本文引用的文献

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Regulatory circuit for responses of nitrogen catabolic gene expression to the GLN3 and DAL80 proteins and nitrogen catabolite repression in Saccharomyces cerevisiae.酿酒酵母中氮分解代谢基因表达对GLN3和DAL80蛋白的响应以及氮代谢物阻遏的调控回路。
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在模式丝状真菌构巢曲霉中对番茄真菌病原体黄枝孢菌无毒基因Avr9的启动子分析。
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Interaction between major nitrogen regulatory protein NIT2 and pathway-specific regulatory factor NIT4 is required for their synergistic activation of gene expression in Neurospora crassa.粗糙脉孢菌中,主要氮调节蛋白NIT2和途径特异性调节因子NIT4之间的相互作用是它们协同激活基因表达所必需的。
Mol Cell Biol. 1998 Jul;18(7):3983-90. doi: 10.1128/MCB.18.7.3983.
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Identification of the native NIT2 major nitrogen regulatory protein in nuclear extracts of Neurospora crassa.在粗糙脉孢菌核提取物中鉴定天然NIT2主要氮调节蛋白。
Genetica. 1996 Mar;97(2):153-63. doi: 10.1007/BF00054622.
7
Binding affinity and functional significance of NIT2 and NIT4 binding sites in the promoter of the highly regulated nit-3 gene, which encodes nitrate reductase in Neurospora crassa.在高度调控的nit-3基因启动子中,NIT2和NIT4结合位点的结合亲和力及功能意义,该基因在粗糙脉孢菌中编码硝酸还原酶。
J Bacteriol. 1995 Nov;177(21):6093-9. doi: 10.1128/jb.177.21.6093-6099.1995.
GATA-1含锌DNA结合结构域特定DNA复合物的核磁共振结构
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