Boffi A, Verzili D, Chiancone E, Leone M, Cupane A, Militello V, Vitrano E, Cordone L, Yu W, Di Iorio E E
CNR Center of Molecular Biology, Department of Biochemical Sciences, University La Sapienza, Roma, Italy.
Biophys J. 1994 Oct;67(4):1713-23. doi: 10.1016/S0006-3495(94)80645-9.
The study of the thermal evolution of the Soret band in heme proteins has proved to be a useful tool to understand their stereodynamic properties; moreover, it enables one to relate protein matrix fluctuations and functional behavior when carried out in combination with kinetic experiments on carbon monoxide rebinding after flash photolysis. In this work, we report the thermal evolution of the Soret band of deoxy, carbonmonoxy, and nitric oxide derivatives of the cooperative homodimeric Scapharca inaequivalvis hemoglobin in the temperature range 10-300 K and the carbon monoxide rebinding kinetics after flash photolysis in the temperature range 60-200 K. The two sets of results indicate that Scapharca hemoglobin has a very rigid protein structure compared with other hemeproteins. This feature is brought out i) by the absence of nonharmonic contributions to the soft modes coupled to the Soret band in the liganded derivatives, and ii) by the almost "in plane" position of the iron atom in the photoproduct obtained approximately 10(-8) s after dissociating the bound carbon monoxide molecule at 15 K.
研究血红素蛋白中索雷特带的热演化已被证明是理解其立体动力学性质的有用工具;此外,当与闪光光解后一氧化碳再结合的动力学实验相结合进行时,它能使人们将蛋白质基质波动与功能行为联系起来。在这项工作中,我们报告了在10 - 300 K温度范围内,协同同二聚体不等边紫蛤血红蛋白的脱氧、一氧化碳结合和一氧化氮衍生物的索雷特带的热演化,以及在60 - 200 K温度范围内闪光光解后的一氧化碳再结合动力学。这两组结果表明,与其他血红素蛋白相比,不等边紫蛤血红蛋白具有非常刚性的蛋白质结构。这一特征表现为:i)在配体衍生物中,与索雷特带耦合的软模不存在非谐贡献;ii)在15 K下使结合的一氧化碳分子解离后约10(-8) s获得的光产物中,铁原子几乎处于“平面内”位置。