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质粒pSa的sulI基因直接重复序列的DNA序列

DNA sequence of direct repeats of the sulI gene of plasmid pSa.

作者信息

Valentine C R, Heinrich M J, Chissoe S L, Roe B A

机构信息

National Center for Toxicological Research, Jefferson, Arkansas 72079-9501.

出版信息

Plasmid. 1994 Sep;32(2):222-7. doi: 10.1006/plas.1994.1059.

Abstract

The restriction enzyme and genetic map of the antibiotic-resistance region of plasmid pSa is related to Tn21 integrons by the insertion of 5.4 kb containing a chloramphenicol resistance gene (catII) and a 1.1-kb direct repeat. We report here the nucleotide sequences of both copies of the repeat with adjoining sequences. They were identical for 1065 bp and contained the entire coding sequence of the sulfanilamide resistance gene, sulI. Since only the first copy of the repeat confers sulfonamide resistance, this leads to the conclusion that no promoter was available for the second copy. The sequence of the pSa sulI gene was identical to several published sulI sequences from other plasmids. The first junction point of the catII-containing insert was identical to the sequence for pDG0100; the second junction occurred farther into the 3'-conserved segment of integrons than does that of pDG0100. A recent report of these junction sequences for pSa and pDG0100 differs from our sequences by one nucleotide. Two additional differences were an insert of 41 bases and a single base insertion between sulI and ORF341 in our sequence. Our sequenced regions have been assigned GenBank Accession Nos. UO4277 and UO4278 for the first and second sulI genes of pSa, respectively.

摘要

质粒pSa抗生素抗性区域的限制酶图谱和遗传图谱通过插入一段含氯霉素抗性基因(catII)的5.4 kb片段和一个1.1 kb的同向重复序列与Tn21整合子相关。我们在此报告该重复序列两个拷贝及其相邻序列的核苷酸序列。它们在1065 bp的长度内完全相同,并且包含磺胺抗性基因sulI的完整编码序列。由于只有第一个重复拷贝赋予磺胺抗性,因此可以得出结论,第二个拷贝没有启动子。pSa的sulI基因序列与其他质粒中已发表的几个sulI序列相同。含catII插入片段的第一个连接点与pDG0100的序列相同;第二个连接点比pDG0100的连接点更深入整合子的3'保守区段。最近一篇关于pSa和pDG0100这些连接序列的报告与我们的序列有一个核苷酸的差异。另外两个差异是我们的序列中在sulI和ORF341之间有一个41个碱基的插入片段和一个单碱基插入。我们测序的区域已分别被GenBank收录,登录号为UO4277和UO4278,分别对应pSa的第一个和第二个sulI基因。

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