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杜克雷嗜血杆菌广宿主范围质粒pLS88的全核苷酸序列分析

An analysis of the complete nucleotide sequence of the Haemophilus ducreyi broad-host-range plasmid pLS88.

作者信息

Dixon L G, Albritton W L, Willson P J

机构信息

Department of Medical Microbiology and Infectious Diseases, University of Alberta, Edmonton, Canada.

出版信息

Plasmid. 1994 Sep;32(2):228-32. doi: 10.1006/plas.1994.1060.

Abstract

We present an analysis of the complete nucleotide sequence of pLS88, a naturally occurring, 4.8-kb broad-host-range plasmid isolated from Haemophilus ducreyi and encoding resistance to sulfonamides, streptomycin, and kanamycin. Sequence analysis of the genes encoding sulfonamide and streptomycin resistance revealed homology to the RSF1010 sulII and strA genes. The sulII-strA intergenic region of pLS88 has a 38-bp deletion identical to that of the RSF1010-like plasmid pHD8.1, isolated from Actinobacillus pleuropneumoniae. The kanamycin resistance gene shows strong homology to Tn903, but lacks the inverted repeats of the transposon. No other genes have been identified. The region downstream of the kanamycin resistance gene shows homology to the RSF1010 oriV region; however, this region is not essential to plasmid replication. The ori of pLS88 is contained within a 1060-bp region and does not appear to contain structures typical of plasmid origins. This region is flanked by DNA showing strong homology to regions both upstream and downstream of the Haemophilus influenzae ROB-1 beta-lactamase gene. Because of the small size of the origin, pLS88 appears to resemble the structure of narrow-host-range plasmids, but replicates, via an as yet unidentified mechanism, as a broad-host-range plasmid.

摘要

我们对pLS88的完整核苷酸序列进行了分析,pLS88是一种天然存在的4.8 kb广谱质粒,从杜氏嗜血杆菌中分离得到,编码对磺胺类药物、链霉素和卡那霉素的抗性。对编码磺胺类药物和链霉素抗性的基因进行序列分析,发现其与RSF1010的sulII和strA基因具有同源性。pLS88的sulII-strA基因间区域有一个38 bp的缺失,与从胸膜肺炎放线杆菌中分离得到的RSF1010样质粒pHD8.1相同。卡那霉素抗性基因与Tn903具有高度同源性,但缺少转座子的反向重复序列。未鉴定出其他基因。卡那霉素抗性基因下游区域与RSF1010 oriV区域具有同源性;然而该区域对质粒复制并非必需。pLS88的ori位于一个1060 bp的区域内,似乎不包含典型的质粒起源结构。该区域两侧的DNA与流感嗜血杆菌ROB-1β-内酰胺酶基因上下游区域具有高度同源性。由于起源区域较小,pLS88似乎类似于窄宿主范围质粒的结构,但通过一种尚未明确的机制作为广谱质粒进行复制。

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