Denu J M, Zhou G, Guo Y, Dixon J E
Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor 48109-0606.
Biochemistry. 1995 Mar 14;34(10):3396-403. doi: 10.1021/bi00010a031.
The mechanism of catalysis for the human dual-specific (vaccinia H1-related) protein-tyrosine-phosphatase was investigated. The pH dependence of the kcat value is bell-shaped when p-nitrophenyl phosphate was employed as a model substrate. The kcat/Km pH profile rises with a slope of 2 and decreases with a slope of -1, indicating that two groups must be unprotonated and one group must be protonated for activity. An amino acid residue with an apparent pKa value of 5.5 +/- 0.2 must be unprotonated and a residue with a pKa value of 5.7 must be unprotonated for activity. The pKa value of the catalytic cysteine-124 (C124) was 5.6 +/- 0.1. The aspartic acid-92-asparagine (D92N) mutant enzyme was 100-fold less active than the native enzyme and exhibited the loss of the basic limb in the pH profiles, suggesting that in the native enzyme D92 must be protonated for activity. The D92 residue is conserved throughout the entire family of dual-specific phosphatases. Mutants glutamic acid-6-glutamine, glutamic acid-32-glutamine, aspartic acid-14-asparagine, and aspartic acid-110-asparagine had less than a 2-fold effect on the kinetic parameters when compared to native enzyme. Based upon the lack of a "burst" in rapid reaction kinetics, formation of the intermediate is rate-limiting with both native and D92N mutant enzymes. In agreement with rate-limiting formation of the intermediate, the pKa value of 5.5 for the group which must be unprotonated for activity was assigned to C124.(ABSTRACT TRUNCATED AT 250 WORDS)
对人双特异性(与痘苗病毒H1相关)蛋白酪氨酸磷酸酶的催化机制进行了研究。当使用对硝基苯磷酸作为模型底物时,kcat值的pH依赖性呈钟形。kcat/Km的pH曲线以斜率2上升并以斜率-1下降,表明两个基团必须未质子化且一个基团必须质子化才有活性。一个表观pKa值为5.5±0.2的氨基酸残基必须未质子化,一个pKa值为5.7的残基也必须未质子化才有活性。催化性半胱氨酸-124(C124)的pKa值为5.6±0.1。天冬氨酸-92-天冬酰胺(D92N)突变酶的活性比天然酶低100倍,并且在pH曲线中显示出碱性部分的缺失,这表明在天然酶中D92必须质子化才有活性。D92残基在整个双特异性磷酸酶家族中是保守的。与天然酶相比,谷氨酸-6-谷氨酰胺、谷氨酸-32-谷氨酰胺、天冬氨酸-14-天冬酰胺和天冬氨酸-110-天冬酰胺突变体对动力学参数的影响小于2倍。基于快速反应动力学中缺乏“爆发”现象,中间体的形成对天然酶和D92N突变酶来说都是限速步骤。与中间体形成的限速作用一致,对于活性所必需的未质子化基团,其pKa值5.5被指定为C124。(摘要截断于250字)