Suppr超能文献

简单和复杂真核生物的基因组中存在过量的长寡嘌呤序列。

An overabundance of long oligopurine tracts occurs in the genome of simple and complex eukaryotes.

作者信息

Behe M J

机构信息

Department of Chemistry, Lehigh University, Bethlehem, PA 18015.

出版信息

Nucleic Acids Res. 1995 Feb 25;23(4):689-95. doi: 10.1093/nar/23.4.689.

Abstract

A search of sequence information in the GenBank files shows that tracts of 15-30 contiguous purines are greatly overrepresented in all eukaryotic species examined, ranging from yeast to human. Such an overabundance does not occur in prokaryotic sequences. The large increase in the number of oligopurine tracts cannot be explained as a simple consequence of base composition, nearest-neighbor frequencies, or the occurrence of an overabundance of oligoadenosine tracts. Oligopurine sequences have previously been shown to be versatile structural elements in DNA, capable of occuring in several alternate conformations. Thus the bias toward long oligopurine tracts in eukaryotic DNA may reflect the usefulness of these structurally versatile sequences in cell function.

摘要

对GenBank文件中的序列信息进行搜索后发现,在所有已检测的真核生物物种(从酵母到人类)中,15至30个连续嘌呤的片段数量大大超标。而在原核生物序列中并未出现这种过量情况。寡嘌呤片段数量的大幅增加不能简单地解释为碱基组成、相邻碱基频率或寡腺苷酸片段过量出现的结果。此前已经表明,寡嘌呤序列是DNA中多功能的结构元件,能够以几种不同的构象出现。因此,真核生物DNA中长寡嘌呤片段的偏向性可能反映了这些结构多样的序列在细胞功能中的有用性。

相似文献

4
An oligopurine sequence bias occurs in eukaryotic viruses.真核病毒中存在寡嘌呤序列偏向性。
Nucleic Acids Res. 1988 Feb 25;16(4):1517-28. doi: 10.1093/nar/16.4.1517.
8
Bias of purine stretches in sequenced chromosomes.测序染色体中嘌呤序列的偏差。
Comput Chem. 2002 Jul;26(5):531-41. doi: 10.1016/s0097-8485(02)00013-x.

引用本文的文献

7
Triple-helix potential of the mouse genome.小鼠基因组的三螺旋结构潜力。
Proc Natl Acad Sci U S A. 2022 May 10;119(19):e2203967119. doi: 10.1073/pnas.2203967119. Epub 2022 May 3.

本文引用的文献

9
Competitive nucleosome reconstitution of polydeoxynucleotides containing oligoguanosine tracts.
J Mol Biol. 1989 Jul 20;208(2):297-306. doi: 10.1016/0022-2836(89)90390-2.
10
Nucleosome reconstitution of core-length poly(dG).poly(dC) and poly(rG-dC).poly(rG-dC).
Biochemistry. 1989 Feb 7;28(3):975-80. doi: 10.1021/bi00429a009.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验