Portais J C, Schuster R, Merle M, Canioni P
Départment de RMN Cellulaire, Institut de Biochimie Cellulaire du CNRS, Bordeaux, France.
Eur J Biochem. 1993 Oct 1;217(1):457-68. doi: 10.1111/j.1432-1033.1993.tb18265.x.
A mathematical model of mammalian cell intermediary metabolism is presented. It describes the distribution of the carbon-13 isotope (13C) at the different carbon positions of metabolites in cells fed with 13C-enriched substrates. The model allows the determination of fluxes through different metabolic pathways from 13C- and 1H-NMR spectroscopy and mass spectrometry data. The considered metabolic network includes glycolysis, gluconeogenesis, the citric acid cycle and a number of reactions corresponding to protein or fatty acid metabolism. The model was used for calculating metabolic fluxes in a rat tumor cell line, the C6 glioma, incubated with [1-13C]glucose. After evolution to metabolic and isotopic steady states, the intracellular metabolites were extracted with perchloric acid. The specific enrichments of glutamate, aspartate and alanine carbons were determined from 13C-, 1H-NMR spectroscopy, or mass spectrometry data. Taking into account the rate of glucose consumption and of lactate formation, determined from the evolution of glucose and lactate contents in the cell medium, and knowing the activity of the hexose monophosphate shunt, it was possible to estimate the absolute values of all the considered fluxes. From the analysis the following results were obtained. (a) Glucose accounts for about 78% of the pyruvate and 57% of the CoASAc. (b) A metabolic channelling occurs at the citric acid cycle level; it favours the conversion of carbons 2, 3, 4, and 5 of 2-oxoglutarate into carbons 1, 2, 3, and 4 of oxaloacetate, respectively. The percentage of channelled metabolites amounts to 39%. (c) The pyruvate carboxylase activity and the efflux from the citric acid cycle are estimated to be very low, suggesting a lack of glutamine production in C6 cells. The results emphasize different metabolic characteristics of C6 cells when compared to astrocytes, their normal counterpart.
本文提出了一个哺乳动物细胞中间代谢的数学模型。该模型描述了用富含碳-13(13C)的底物喂养细胞时,代谢物不同碳位置上碳-13同位素(13C)的分布情况。该模型能够根据13C和1H核磁共振波谱以及质谱数据确定通过不同代谢途径的通量。所考虑的代谢网络包括糖酵解、糖异生、柠檬酸循环以及一些与蛋白质或脂肪酸代谢相应的反应。该模型用于计算用[1-13C]葡萄糖孵育的大鼠肿瘤细胞系C6胶质瘤中的代谢通量。在达到代谢和同位素稳态后,用高氯酸提取细胞内代谢物。通过13C、1H核磁共振波谱或质谱数据确定谷氨酸、天冬氨酸和丙氨酸碳的特定富集情况。考虑到从细胞培养基中葡萄糖和乳酸含量的变化确定的葡萄糖消耗速率和乳酸形成速率,并了解磷酸己糖支路的活性,就有可能估算所有考虑通量的绝对值。通过分析得出了以下结果。(a)葡萄糖约占丙酮酸的78%和乙酰辅酶A的57%。(b)在柠檬酸循环水平发生代谢通道化;它有利于分别将2-氧代戊二酸的碳2、3、4和5转化为草酰乙酸的碳1、2、3和4。通道化代谢物的百分比为39%。(c)丙酮酸羧化酶活性和从柠檬酸循环的流出量估计非常低,这表明C6细胞中缺乏谷氨酰胺的产生。结果强调了C6细胞与它们正常对应物星形胶质细胞相比具有不同的代谢特征。