Dölz R, Mossé M O, Slonimski P P, Bairoch A, Linder P
Biocomputing, Biozentrum, Basel, Switzerland.
Nucleic Acids Res. 1994 Sep;22(17):3459-61. doi: 10.1093/nar/22.17.3459.
We continued our effort to make a comprehensive database (LISTA) for the yeast Saccharomyces cerevisiae. In this database each sequence has been attributed a single genetic name. In the case of duplicated sequences a simple method has been applied to distinguish between sequences of one and the same gene from non-allelic sequences of duplicated genes. If necessary, synonyms are given in the case of allelic duplicated sequences. Thus sequences can be found either by the name or by synonyms given in LISTA. Each entry contains the genetic name, the mnemonic from the EMBL data bank, the codon bias, reference of the publication of the sequence, Chromosomal location as far as known, Swissprot and EMBL accession numbers. To obtain more information on the included sequences, each entry has been screened against non-redundant nucleotide and protein data bank collections resulting in LISTA-HON and LISTA-HOP. The LISTA data base can be linked to the associated data sets or to nucleotide and protein banks by the Sequence Retrieval System (SRS).
我们继续努力为酿酒酵母构建一个全面的数据库（LISTA）。在这个数据库中，每个序列都被赋予了一个单一的基因名称。对于重复序列，我们应用了一种简单的方法来区分同一基因的序列和重复基因的非等位序列。如有必要，对于等位重复序列会给出同义词。因此，可以通过名称或LISTA中给出的同义词来查找序列。每个条目包含基因名称、来自EMBL数据库的助记符、密码子偏好性、序列发表的参考文献、已知的染色体定位、Swissprot和EMBL登录号。为了获取有关所包含序列的更多信息，每个条目都已针对非冗余核苷酸和蛋白质数据库集合进行筛选，从而得到LISTA - HON和LISTA - HOP。LISTA数据库可以通过序列检索系统（SRS）链接到相关数据集或核苷酸和蛋白质库。
