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酵母中两个相连核糖体蛋白基因的结构与组织

Structure and organization of two linked ribosomal protein genes in yeast.

作者信息

Molenaar C M, Woudt L P, Jansen A E, Mager W H, Planta R J, Donovan D M, Pearson N J

出版信息

Nucleic Acids Res. 1984 Oct 11;12(19):7345-58. doi: 10.1093/nar/12.19.7345.

DOI:10.1093/nar/12.19.7345
PMID:6387623
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC320166/
Abstract

The genes encoding yeast ribosomal proteins rp28 and S16A are linked and occur duplicated in the yeast genome. In both gene pairs the genes are approximately 600 bp apart and are both transcribed in the same direction. Both ribosomal protein genes resemble other ribosomal protein genes studied so far in many structural aspects. The genes are interrupted by an intron near the 5'-end of their coding sequence. In addition the flanking regions contain several conserved sequence elements, which may function in transcription initiation and termination. In agreement with findings concerning other cloned yeast ribosomal protein genes, upstream homology blocks occur that may be involved in coordinate control of ribosomal protein gene transcription. The complete pattern of conserved and diverged sequences between the two duplicate gene pairs is presented.

摘要

编码酵母核糖体蛋白rp28和S16A的基因是连锁的,并且在酵母基因组中呈重复出现。在这两个基因对中,基因之间的距离约为600 bp,且转录方向相同。这两个核糖体蛋白基因在许多结构方面与迄今为止研究的其他核糖体蛋白基因相似。这些基因在其编码序列的5'端附近被一个内含子中断。此外,侧翼区域包含几个保守的序列元件,它们可能在转录起始和终止中发挥作用。与其他克隆的酵母核糖体蛋白基因的研究结果一致,存在上游同源性模块,可能参与核糖体蛋白基因转录的协调控制。本文展示了两个重复基因对之间保守和差异序列的完整模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c01/320166/85f8e3731119/nar00337-0075-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c01/320166/d28f3e00c9ac/nar00337-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c01/320166/85f8e3731119/nar00337-0075-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c01/320166/d28f3e00c9ac/nar00337-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c01/320166/85f8e3731119/nar00337-0075-a.jpg

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本文引用的文献

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Ribosomal protein genes of yeast contain intervening sequences.酵母的核糖体蛋白基因含有间隔序列。
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The genes for yeast ribosomal proteins S24 and L46 are adjacent and divergently transcribed.
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Conserved sequences upstream of yeast ribosomal protein genes.酵母核糖体蛋白基因上游的保守序列。
Curr Genet. 1985;9(4):273-7. doi: 10.1007/BF00419955.
9
Saccharomyces cerevisiae coordinates accumulation of yeast ribosomal proteins by modulating mRNA splicing, translational initiation, and protein turnover.酿酒酵母通过调节mRNA剪接、翻译起始和蛋白质周转来协调酵母核糖体蛋白的积累。
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Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes.酵母中的密码子使用情况:聚类分析能清晰区分高表达基因和低表达基因。
Nucleic Acids Res. 1986 Jul 11;14(13):5125-43. doi: 10.1093/nar/14.13.5125.
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Molecular cloning of the rDNA of Saccharomyces rosei and comparison of its transcription initiation region with that of Saccharomyces carlsbergensis.玫瑰酵母rDNA的分子克隆及其转录起始区域与卡尔斯伯酵母的比较。
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Evidence for the biochemical role of an internal sequence in yeast nuclear mRNA introns: implications for U1 RNA and metazoan mRNA splicing.酵母核mRNA内含子内部序列的生化作用证据:对U1 RNA和后生动物mRNA剪接的影响
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