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连锁异质性的联合检验。

A combined test of linkage heterogeneity.

作者信息

Goldstein D R

机构信息

Department of Statistics, University of California, Berkeley 94720.

出版信息

Am J Hum Genet. 1994 Oct;55(4):841-8.

PMID:7942861
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1918301/
Abstract

This paper focuses on the problem of testing for heterogeneity once linkage is established. In an investigation of genetic linkage, Morton first proposed a general purpose test to detect heterogeneity in the recombination fraction. Two more commonly used tests of linkage heterogeneity are the admixture test (A-test) of Smith, Ott, and Risch and Baron, and the B-test of Risch. All are likelihood-ratio tests, but they differ in the models specifying the heterogeneity. A new test of heterogeneity in the presence of linkage is presented here. I propose a mixture model of heterogeneity, which allows the recombination fraction to vary among families, as does the B-model, yet also allows some families to be unlinked, as the A-model does. This model contains the A and B models as special cases and thus allows a direct test (D-test), which can provide justification for choosing one of these extremes.

摘要

本文关注的是一旦建立连锁关系后异质性检验的问题。在一项基因连锁研究中,莫顿首先提出了一种通用检验方法,用于检测重组率中的异质性。另外两种更常用的连锁异质性检验方法是史密斯、奥特、里施和巴伦的混合检验(A检验)以及里施的B检验。所有这些都是似然比检验,但它们在指定异质性的模型方面有所不同。本文提出了一种在存在连锁关系时的新异质性检验方法。我提出了一种异质性混合模型,该模型允许重组率在不同家族间变化,这与B模型一样,但也允许一些家族不存在连锁关系,这与A模型一样。此模型包含A模型和B模型作为特殊情况,因此允许进行直接检验(D检验),该检验可为选择这两种极端情况之一提供依据。

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本文引用的文献

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TESTING FOR HETEROGENEITY OF RECOMBINATION FRACTION VALUES IN HUMAN GENETICS.人类遗传学中重组率值的异质性检验
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The search for heterogeneity in insulin-dependent diabetes mellitus (IDDM): linkage studies, two-locus models, and genetic heterogeneity.胰岛素依赖型糖尿病(IDDM)异质性的研究:连锁研究、双基因座模型与遗传异质性
Am J Hum Genet. 1983 Nov;35(6):1139-55.
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A new statistical test for linkage heterogeneity.一种用于连锁异质性的新统计检验方法。
Am J Hum Genet. 1988 Feb;42(2):353-64.
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Further evidence for genetic heterogeneity in the fragile X syndrome.脆性X综合征基因异质性的进一步证据。
Hum Genet. 1987 Apr;75(4):311-21. doi: 10.1007/BF00284100.
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Linkage of early-onset familial breast cancer to chromosome 17q21.早发性家族性乳腺癌与17号染色体q21区的连锁关系。
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Linkage relationships between DXS105, DXS98, and other polymorphic DNA markers flanking the fragile X locus.DXS105、DXS98与脆性X位点侧翼的其他多态性DNA标记之间的连锁关系。
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Waardenburg syndrome (WS) type I is caused by defects at multiple loci, one of which is near ALPP on chromosome 2: first report of the WS consortium.I型瓦登伯革氏综合征(WS)由多个基因座的缺陷引起,其中一个基因座位于2号染色体上的ALPP附近:WS联盟的首次报告。
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