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链霉菌质粒pSN22转移基因的调控:TraR与启动子区域相互作用的体内和体外研究

Regulation of the transfer genes of Streptomyces plasmid pSN22: in vivo and in vitro study of the interaction of TraR with promoter regions.

作者信息

Kataoka M, Kosono S, Seki T, Yoshida T

机构信息

International Center of Cooperative Research in Biotechnology, Faculty of Engineering, Osaka University, Japan.

出版信息

J Bacteriol. 1994 Dec;176(23):7291-8. doi: 10.1128/jb.176.23.7291-7298.1994.

DOI:10.1128/jb.176.23.7291-7298.1994
PMID:7961501
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC197118/
Abstract

Expression of the tra operon, essential for conjugative transfer of the 11-kb Streptomyces nigrifaciens plasmid pSN22, is negatively regulated by traR, which is located upstream of the tra operon and transcribed in the opposite orientation. The transcriptional start points for the tra and traR mRNAs were determined by primer extension; they are 72 bp apart and have identical -10 promoter sequences. The TraR protein was overexpressed in Escherichia coli and used for gel retardation and DNase I protection experiments. It bound specifically to the bidirectional tra-traR promoter region and protected four DNA regions, each of which contains a similar 12-bp sequence. The binding was strongest to the region downstream of the tra promoter, probably ensuring that expression of the potentially lethal traB gene is turned off before traR. The efficiency of intramycelial plasmid transfer was decreased by the mutation at the downstream region.

摘要

tra操纵子对于11kb的黑色链霉菌质粒pSN22的接合转移至关重要,其表达受到traR的负调控,traR位于tra操纵子上游且转录方向相反。通过引物延伸确定了tra和traR mRNA的转录起始点;它们相距72bp且具有相同的-10启动子序列。TraR蛋白在大肠杆菌中过表达,并用于凝胶阻滞和DNase I保护实验。它特异性结合双向tra-traR启动子区域并保护四个DNA区域,每个区域都包含一个相似的12bp序列。结合在tra启动子下游区域最强,这可能确保潜在致死性的traB基因在traR之前关闭表达。下游区域的突变降低了菌丝内质粒转移的效率。

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本文引用的文献

1
Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: characterization of a kil-kor system associated with transfer.来自产二素链霉菌的接合整合元件pSAM2的转移功能:与转移相关的一个致死-抑制系统的特性
J Bacteriol. 1993 Sep;175(17):5529-38. doi: 10.1128/jb.175.17.5529-5538.1993.
2
Replication of the Streptomyces plasmid pSN22 through single-stranded intermediates.链霉菌质粒pSN22通过单链中间体进行复制。
Mol Gen Genet. 1994 Jan;242(2):130-6. doi: 10.1007/BF00391005.
3
The linear Streptomyces plasmid pBL1: analyses of transfer functions.
GntR/HutC家族信号结构域的结构表征
Protein Sci. 2006 Jun;15(6):1506-11. doi: 10.1110/ps.062146906. Epub 2006 May 2.
4
Conjugative plasmid transfer in gram-positive bacteria.革兰氏阳性菌中的接合质粒转移
Microbiol Mol Biol Rev. 2003 Jun;67(2):277-301, table of contents. doi: 10.1128/MMBR.67.2.277-301.2003.
5
Complete 1H, 13C, and 15N assignments of the N-terminal DNA binding domain of the TraR protein.
J Biomol NMR. 2002 Jun;23(2):161-2. doi: 10.1023/a:1016312307257.
6
KorSA from the Streptomyces integrative element pSAM2 is a central transcriptional repressor: target genes and binding sites.来自链霉菌整合元件pSAM2的KorSA是一种核心转录阻遏物:靶基因和结合位点。
J Bacteriol. 2000 Mar;182(5):1243-50. doi: 10.1128/JB.182.5.1243-1250.2000.
7
Development of a temperature-inducible expression system for Streptomyces spp.用于链霉菌属的温度诱导表达系统的开发
J Bacteriol. 1996 Sep;178(18):5540-2. doi: 10.1128/jb.178.18.5540-5542.1996.
8
Genes encoding the pKM101 conjugal mating pore are negatively regulated by the plasmid-encoded KorA and KorB proteins.编码pKM101接合交配孔的基因受到质粒编码的KorA和KorB蛋白的负调控。
J Bacteriol. 1996 Aug;178(15):4392-9. doi: 10.1128/jb.178.15.4392-4399.1996.
9
Identification and functional analysis of the transfer region of plasmid pMEA300 of the methylotrophic actinomycete Amycolatopsis methanolica.嗜甲基放线菌甲醇拟无枝酸菌质粒pMEA300转移区域的鉴定与功能分析
J Bacteriol. 1995 Nov;177(22):6499-505. doi: 10.1128/jb.177.22.6499-6505.1995.
Mol Gen Genet. 1994 Feb;242(4):374-82. doi: 10.1007/BF00281786.
4
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5
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Mol Microbiol. 1993 Oct;10(1):157-70. doi: 10.1111/j.1365-2958.1993.tb00912.x.
6
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Methods Enzymol. 1982;90 Pt E:459-63. doi: 10.1016/s0076-6879(82)90171-9.
7
Physical analysis of antibiotic-resistance genes from Streptomyces and their use in vector construction.链霉菌抗生素抗性基因的物理分析及其在载体构建中的应用。
Gene. 1982 Nov;20(1):51-62. doi: 10.1016/0378-1119(82)90086-5.
8
Transcriptional control signals of a eukaryotic protein-coding gene.真核生物蛋白质编码基因的转录控制信号
Science. 1982 Jul 23;217(4557):316-24. doi: 10.1126/science.6283634.
9
pIJ101, a multi-copy broad host-range Streptomyces plasmid: functional analysis and development of DNA cloning vectors.pIJ101,一种多拷贝广宿主范围的链霉菌质粒:功能分析及DNA克隆载体的开发
Mol Gen Genet. 1982;185(2):223-8. doi: 10.1007/BF00330791.
10
Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.通过聚丙烯酰胺凝胶电泳研究乳糖阻遏物-操纵基因相互作用的平衡与动力学
Nucleic Acids Res. 1981 Dec 11;9(23):6505-25. doi: 10.1093/nar/9.23.6505.