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蛋白质合成的终止。

Termination of protein synthesis.

作者信息

Tuite M F, Stansfield I

机构信息

Research School of Biosciences, University of Kent, Canterbury, UK.

出版信息

Mol Biol Rep. 1994 May;19(3):171-81. doi: 10.1007/BF00986959.

DOI:10.1007/BF00986959
PMID:7969105
Abstract

One of three mRNA codons--UAA, UAG and UGA--is used to signal to the elongating ribosome that translation should be terminated at this point. Upon the arrival of the stop codon at the ribosomal acceptor(A)-site, a protein release factor (RF) binds to the ribosome resulting in the peptidyl transferase centre of the ribosome switching to a hydrolytic function to remove the completed polypeptide chain from the peptidyl-tRNA bound at the adjacent ribosomal peptidyl(P)-site. In this review recent advances in our understanding of the mechanism of termination in the bacterium Escherichia coli will be summarised, paying particular attention to the roles of 16S ribosomal RNA and the release factors RF-1, RF-2 and RF-3 in stop codon recognition. Our understanding of the translation termination process in eukaryotes is much more rudimentary with the identity of the single eukaryotic release factor (eRF) still remaining elusive. Finally, several examples of how the termination mechanism can be subverted either to expand the genetic code (e.g. selenocysteine insertion at UGA codons) or to regulate the expression of mammalian retroviral or plant viral genomes will be discussed.

摘要

三种mRNA密码子(UAA、UAG和UGA)中的一种用于向正在延伸的核糖体发出信号,表明翻译应在此处终止。当终止密码子到达核糖体的受体(A)位点时,一种蛋白质释放因子(RF)会与核糖体结合,导致核糖体的肽基转移酶中心转变为水解功能,从而将完整的多肽链从结合在相邻核糖体肽基(P)位点的肽基-tRNA上移除。在这篇综述中,我们将总结对细菌大肠杆菌中终止机制理解的最新进展,特别关注16S核糖体RNA以及释放因子RF-1、RF-2和RF-3在终止密码子识别中的作用。我们对真核生物翻译终止过程的理解还非常初步,单一真核生物释放因子(eRF)的身份仍然难以捉摸。最后,将讨论几个终止机制被颠覆的例子,这些例子要么是为了扩展遗传密码(例如在UGA密码子处插入硒代半胱氨酸),要么是为了调控哺乳动物逆转录病毒或植物病毒基因组的表达。

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1
Termination of protein synthesis.蛋白质合成的终止。
Mol Biol Rep. 1994 May;19(3):171-81. doi: 10.1007/BF00986959.
2
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本文引用的文献

1
Two regions of the Escherichia coli 16S ribosomal RNA are important for decoding stop signals in polypeptide chain termination.大肠杆菌16S核糖体RNA的两个区域对于多肽链终止过程中终止信号的解码至关重要。
Nucleic Acids Res. 1993 May 11;21(9):2109-15. doi: 10.1093/nar/21.9.2109.
2
Functional domains in the Escherichia coli release factors. Activities of hybrids between RF-1 and RF-2.大肠杆菌释放因子中的功能结构域。RF-1与RF-2之间杂种的活性。
Eur J Biochem. 1993 Apr 15;213(2):749-56. doi: 10.1111/j.1432-1033.1993.tb17816.x.
3
Are the tryptophanyl-tRNA synthetase and the peptide-chain-release factor from higher eukaryotes one and the same protein?
ERA的晶体结构:一种含有RNA结合基序的GTP酶依赖性细胞周期调节因子。
Proc Natl Acad Sci U S A. 1999 Jul 20;96(15):8396-401. doi: 10.1073/pnas.96.15.8396.
4
In vitro selection and evolution of functional proteins by using ribosome display.利用核糖体展示技术进行功能性蛋白质的体外筛选与进化
Proc Natl Acad Sci U S A. 1997 May 13;94(10):4937-42. doi: 10.1073/pnas.94.10.4937.
5
Molecular weight abnormalities of the CTCF transcription factor: CTCF migrates aberrantly in SDS-PAGE and the size of the expressed protein is affected by the UTRs and sequences within the coding region of the CTCF gene.CTCF转录因子的分子量异常:CTCF在十二烷基硫酸钠-聚丙烯酰胺凝胶电泳(SDS-PAGE)中迁移异常,且所表达蛋白质的大小受CTCF基因编码区内非翻译区(UTRs)和序列的影响。
Nucleic Acids Res. 1997 Feb 1;25(3):466-74. doi: 10.1093/nar/25.3.466.
6
TransTerm: a database of translational signals.翻译术语库:一个翻译信号数据库。
Nucleic Acids Res. 1996 Jan 1;24(1):216-8. doi: 10.1093/nar/24.1.216.
7
Cysteine tRNAs of plant origin as novel UGA suppressors.植物来源的半胱氨酸tRNA作为新型UGA抑制因子。
Nucleic Acids Res. 1995 Nov 25;23(22):4591-7. doi: 10.1093/nar/23.22.4591.
8
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Nucleic Acids Res. 1995 May 11;23(9):1487-94. doi: 10.1093/nar/23.9.1487.
9
Translational termination efficiency in mammals is influenced by the base following the stop codon.哺乳动物中的翻译终止效率受终止密码子后的碱基影响。
Proc Natl Acad Sci U S A. 1995 Jun 6;92(12):5431-5. doi: 10.1073/pnas.92.12.5431.
10
NAC covers ribosome-associated nascent chains thereby forming a protective environment for regions of nascent chains just emerging from the peptidyl transferase center.NAC覆盖核糖体相关的新生肽链,从而为刚从肽基转移酶中心出现的新生肽链区域形成一个保护环境。
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高等真核生物中的色氨酰 - tRNA合成酶和肽链释放因子是同一种蛋白质吗?
Eur J Biochem. 1993 Mar 1;212(2):457-66. doi: 10.1111/j.1432-1033.1993.tb17682.x.
4
Mammalian polypeptide chain release factor and tryptophanyl-tRNA synthetase are distinct proteins.哺乳动物多肽链释放因子和色氨酰-tRNA合成酶是不同的蛋白质。
EMBO J. 1993 Oct;12(10):4013-9. doi: 10.1002/j.1460-2075.1993.tb06079.x.
5
Functional characterization of the eukaryotic SECIS elements which direct selenocysteine insertion at UGA codons.指导硒代半胱氨酸在UGA密码子处插入的真核生物SECIS元件的功能特性。
EMBO J. 1993 Aug;12(8):3315-22. doi: 10.1002/j.1460-2075.1993.tb06001.x.
6
The translational termination signal database.翻译终止信号数据库。
Nucleic Acids Res. 1993 Jul 1;21(13):3119-23. doi: 10.1093/nar/21.13.3119.
7
The second to last amino acid in the nascent peptide as a codon context determinant.新生肽中倒数第二个氨基酸作为密码子上下文决定因素。
EMBO J. 1994 Jan 1;13(1):249-57. doi: 10.1002/j.1460-2075.1994.tb06255.x.
8
Competition between frameshifting, termination and suppression at the frameshift site in the Escherichia coli release factor-2 mRNA.大肠杆菌释放因子-2 mRNA移码位点处移码、终止和抑制之间的竞争。
Nucleic Acids Res. 1993 Nov 11;21(22):5074-8. doi: 10.1093/nar/21.22.5074.
9
A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA nonsense suppressors.一种大肠杆菌的温度敏感突变体,其对UAG/A的错读增强,并且某些tRNA无义抑制子的效率提高。
Mol Gen Genet. 1984;193(1):38-45. doi: 10.1007/BF00327411.
10
Template activity of modified terminator codons.修饰终止密码子的模板活性。
J Biol Chem. 1970 May 25;245(10):2753-7.