Ferrer J C, Turano P, Banci L, Bertini I, Morris I K, Smith K M, Smith M, Mauk A G
Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, Canada.
Biochemistry. 1994 Jun 28;33(25):7819-29. doi: 10.1021/bi00191a009.
Asp235 in yeast cytochrome c peroxidase forms a hydrogen bond with His175, the proximal histidyl residue, that has been suggested to be important in determining the electronic properties of the heme iron and that may be involved in stabilizing the higher oxidation states of the peroxidase that form transiently during catalysis. The current study employs 1H and 15N-NMR spectroscopy to study the electronic properties of and the effects of pH on the active site of the Asp235Ala variant. This variant exhibits three spectroscopic species between pH 5 and 9: a high-spin species that forms at low pH and two low-spin species that form successively at higher pH. Nevertheless, the activity of the variant exhibits a pH dependence virtually identical to that of the wild-type protein, though the activity of the variant is 3 orders of magnitude lower at all values of pH between pH 5 and 8.5. These findings suggest that the spin state and coordination environment of the heme iron in cytochrome c peroxidase do not dictate the rate of substrate (cytochrome c) oxidation. Binding of cyanide to the variant enzyme results in formation of a single species as detected by NMR spectroscopy. Analysis of high-resolution 1D and 2D 1H-NMR and 15N-NMR spectra of the cyanide adduct has permitted characterization of the properties of this derivative and the strength of the proximal ligand bond to the heme iron. Disruption of the hydrogen bond between the proximal histidine and Asp235 that exists in the wild-type enzyme dramatically reduces the strength of the interaction between the proximal ligand and the iron; this effect combined with concurrent changes in the distal heme-binding pocket accounts for the increase in reduction potential reported for the Fe3+/Fe2+ couple. The catalytic consequences of the structural and electronic properties of the variant elucidated in this study are discussed.
酵母细胞色素c过氧化物酶中的Asp235与近端组氨酸残基His175形成氢键,有人认为这对于确定血红素铁的电子性质很重要,并且可能参与稳定过氧化物酶在催化过程中瞬时形成的较高氧化态。当前的研究采用1H和15N核磁共振光谱来研究Asp235Ala变体活性位点的电子性质以及pH对其的影响。该变体在pH 5至9之间呈现出三种光谱形式:在低pH下形成的高自旋形式以及在较高pH下依次形成的两种低自旋形式。然而,该变体的活性表现出与野生型蛋白几乎相同的pH依赖性,尽管在pH 5至8.5之间的所有pH值下,该变体的活性都低3个数量级。这些发现表明,细胞色素c过氧化物酶中血红素铁的自旋状态和配位环境并不决定底物(细胞色素c)氧化的速率。氰化物与变体酶的结合导致通过核磁共振光谱检测到形成单一物种。对氰化物加合物的高分辨率一维和二维1H核磁共振及15N核磁共振光谱的分析使得能够表征该衍生物的性质以及近端配体与血红素铁之间键的强度。野生型酶中存在的近端组氨酸与Asp235之间氢键的破坏显著降低了近端配体与铁之间相互作用的强度;这种效应与远端血红素结合口袋的同时变化共同导致了报道的Fe3+/Fe2+电对还原电位的增加。本文讨论了该研究中阐明的变体的结构和电子性质的催化后果。