Bujons J, Dikiy A, Ferrer J C, Banci L, Mauk A G
Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, Canada.
Eur J Biochem. 1997 Jan 15;243(1-2):72-84. doi: 10.1111/j.1432-1033.1997.72_1a.x.
A new variant of cytochrome-c peroxidase in which the positively charged Arg48 present in the distal heme-binding pocket has been replaced with a Glu residue has been prepared and characterized to explore, in part, the possibility that a negative charge close to the heme could contribute to stabilization of a porphyrin-centered pi-cation radical in the compound I derivative of the variant. Between pH 4 and 8, this variant forms three pH-linked spectroscopic species. The electronic absorption and 1H-NMR spectra of the predominant form at low pH (HS1) are indicative of a high-spin, pentacoordinate heme iron system. Near neutral pH, a second high-spin species (HS2) is dominant, in which the heme iron center is hexacoordinated, with a water molecule as the sixth axial ligand. At high pH, the third form (LS) exhibits the spectroscopic characteristics of a low-spin, hexacoordinate heme center with bishistidine axial ligation. The apparent pKa values for these transitions are 4.4 and 7.4, respectively, in phosphate buffers and 5.0 and 7.1, respectively, in phosphate/nitrate buffers. Replacement of Arg48 with Glu reduces the thermal stability of the enzyme and also decreases the Fe(III)/Fe(II) reduction potential of the enzyme by approximately 50 mV relative to that of the wild-type enzyme. The stability of compound I formed by the variant is decreased although the rate at which it forms is just one order of magnitude less than that of the wild-type enzyme, thus confirming previous results which indicate that the function of residue 48 in the wild-type peroxidase is more related to the stability of compound I than to its formation [Erman, J. E., Vitello, L. B., Miller, M. A. & Kraut, J. (1992) J. Am. Chem. Soc. 114, 6592-6593; Vitello, L. B., Erman, J. E., Miller, M. A., Wang, J. & Kraut, J. (1993) Biochemistry 32, 9807-9818]. Stopped-flow studies failed to detect even transient formation of a porphyrin-centered radical following addition of hydrogen peroxide to the Fe(III)-enzyme. The consequences of this drastic electrostatic modification of the active site on the steady-state kinetics of the variant are relatively minor.
已经制备并表征了一种细胞色素 c 过氧化物酶的新变体,其中位于远端血红素结合口袋中的带正电荷的精氨酸 48 已被谷氨酸残基取代,这在一定程度上是为了探究血红素附近的负电荷是否有助于稳定该变体化合物 I 衍生物中以卟啉为中心的π-阳离子自由基。在 pH 值为 4 至 8 的范围内,该变体形成三种与 pH 相关的光谱物种。低 pH 时主要形式(HS1)的电子吸收光谱和 1H-NMR 光谱表明是一种高自旋、五配位的血红素铁体系。接近中性 pH 时,第二种高自旋物种(HS2)占主导,其中血红素铁中心是六配位的,以水分子作为第六个轴向配体。在高 pH 时,第三种形式(LS)表现出低自旋、六配位血红素中心的光谱特征,轴向配体为双组氨酸。在磷酸盐缓冲液中,这些转变的表观 pKa 值分别为 4.4 和 7.4,在磷酸盐/硝酸盐缓冲液中分别为 5.0 和 7.1。用谷氨酸取代精氨酸 48 会降低酶的热稳定性,并且相对于野生型酶,该酶的 Fe(III)/Fe(II)还原电位也降低了约 50 mV。该变体形成的化合物 I 的稳定性降低,尽管其形成速率仅比野生型酶低一个数量级,从而证实了先前的结果,即野生型过氧化物酶中 48 位残基的功能与其化合物 I 的稳定性而非其形成更相关[埃尔曼,J. E., 维泰洛,L. B., 米勒,M. A. & 克劳特,J. (1992) J. Am. Chem. Soc. 114, 6592 - 6593; 维泰洛,L. B., 埃尔曼,J. E., 米勒,M. A., 王,J. & 克劳特,J. (1993) Biochemistry 32, 9807 - 9818]。停止流动研究未能检测到向 Fe(III) - 酶中加入过氧化氢后卟啉中心自由基的瞬时形成。活性位点这种剧烈的静电修饰对变体稳态动力学的影响相对较小。