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作为一种鸟嘌呤核苷酸交换蛋白的延伸因子EF-1δ中的亮氨酸拉链,在卤虫和非洲爪蟾中是保守的。

The leucine-zipper in elongation factor EF-1 delta, a guanine-nucleotide exchange protein, is conserved in Artemia and Xenopus.

作者信息

Amons R, Guerrucci M A, Karssies R H, Morales J, Cormier P, Möller W, Bellé R

机构信息

Department of Medical Biochemistry, Sylvius Laboratories, Leiden, The Netherlands.

出版信息

Biochim Biophys Acta. 1994 Aug 2;1218(3):346-50. doi: 10.1016/0167-4781(94)90187-2.

Abstract

Elongation factor 1, a complex involved in protein biosynthesis, contains two guanine-nucleotide-exchange proteins EF-1 beta and EF-1 delta. The sequence of EF-1 delta of Artemia was determined with the purified protein. When compared to EF-1 delta from Xenopus, a high degree of identify (80%) was found in the C-terminal domains of the proteins, which contain the guanine-nucleotide-exchange activity. The N-terminal domains share only 23% of the amino acids at identical positions, and therefore they were further analysed for less obvious types of homology. To this end, a published approach for sequence analysis, which can detect peculiar amino acid patterns in proteins was applied. In this way, a weak albeit unmistakable similarity between the two EF-1 delta proteins was demonstrated in the region of the leucine-zippers, apart from the leucine repeat itself. Apparently, they display a common structural pattern in their N-terminal domains, which so far has been observed mainly in transcription factors.

摘要

延伸因子1是一种参与蛋白质生物合成的复合体,包含两种鸟嘌呤核苷酸交换蛋白EF-1β和EF-1δ。利用纯化的蛋白质测定了卤虫EF-1δ的序列。与非洲爪蟾的EF-1δ相比,在蛋白质的C末端结构域中发现了高度的同源性(80%),该结构域含有鸟嘌呤核苷酸交换活性。N末端结构域在相同位置仅共享23%的氨基酸,因此对它们进行了进一步分析,以寻找不太明显的同源类型。为此,应用了一种已发表的序列分析方法,该方法可以检测蛋白质中特殊的氨基酸模式。通过这种方式,除了亮氨酸重复序列本身外,在亮氨酸拉链区域证明了两种EF-1δ蛋白之间存在微弱但明确无误的相似性。显然,它们在N末端结构域中显示出一种共同的结构模式,迄今为止主要在转录因子中观察到这种模式。

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