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全寄生开花植物核小亚基(18S)核糖体DNA中的高核苷酸替换率。

High rates of nucleotide substitution in nuclear small-subunit (18S) rDNA from holoparasitic flowering plants.

作者信息

Nickrent D L, Starr E M

机构信息

Department of Plant Biology, Southern Illinois University, Carbondale 62901.

出版信息

J Mol Evol. 1994 Jul;39(1):62-70. doi: 10.1007/BF00178250.

DOI:10.1007/BF00178250
PMID:8064875
Abstract

Relative rate tests, using Gnetum as a reference taxon, were conducted on nuclear 18S rRNA sequences from 10 angiosperms including autotrophic nonparasites (Arabidopsis, Asarum, Glycine, Malpighia, and Zea), a chlorophyllous hemiparasite (Arceuthobium--Viscaceae), and achlorophyllous holoparasites (Balanophora--Balanophoraceae, Prosopanche--Hydnoraceae, and Rafflesia and Rhizanthes--Rafflesiaceae). Compared with Glycine, the mean number of substitutions per site (K) for five autotrophic angiosperms is 0.036 whereas for the holoparasites K = 0.126, i.e., 3.5 times higher. Comparisons of autotrophic species with short and long generation times showed no differences in K; hence, divergent rRNA sequences in the holoparasites are likely attributable to other mechanisms. These might include genetic bottlenecks, effective population size, and/or molecular drive. High substitution rates appear to be associated only with those parasitic angiosperms that have developed a highly modified haustorial system and extreme nutritional dependence upon the host. At present, high substitution rates in these parasites confound attempts to determine their phylogenetic position relative to other angiosperms.

摘要

以买麻藤属作为参考分类群,对来自10种被子植物的核18S rRNA序列进行了相对速率测试,这些被子植物包括自养非寄生植物(拟南芥、细辛、大豆、金虎尾、玉米)、一种含叶绿素的半寄生植物(油杉寄生——桑寄生科)以及不含叶绿素的全寄生植物(蛇菰——蛇菰科、肉苁蓉——锁阳科、大王花属和寄生花属——大花草科)。与大豆相比,5种自养被子植物每个位点的平均替换数(K)为0.036,而全寄生植物的K值为0.126,即高出3.5倍。对世代周期短和长的自养物种进行比较,K值没有差异;因此,全寄生植物中rRNA序列的差异可能归因于其他机制。这些机制可能包括遗传瓶颈、有效种群大小和/或分子驱动。高替换率似乎仅与那些已发育出高度特化的吸器系统且对宿主有极端营养依赖的寄生被子植物有关。目前,这些寄生虫中的高替换率使得确定它们相对于其他被子植物的系统发育位置的尝试变得复杂。

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本文引用的文献

1
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J Mol Evol. 1993 Aug;37(2):221-32. doi: 10.1007/BF02407359.
2
Collection of small subunit (16S- and 16S-like) ribosomal RNA structures.小亚基(16S及类似16S)核糖体RNA结构的收集
Nucleic Acids Res. 1993 Jul 1;21(13):3051-4. doi: 10.1093/nar/21.13.3051.
3
Compilation of small ribosomal subunit RNA structures.小核糖体亚基RNA结构汇编
异养兰花属的空前平行光合丧失。
Mol Biol Evol. 2019 Sep 1;36(9):1884-1901. doi: 10.1093/molbev/msz111.
4
Mitochondrial genome evolution in parasitic plants.寄生植物中的线粒体基因组进化。
BMC Evol Biol. 2019 Apr 8;19(1):87. doi: 10.1186/s12862-019-1401-8.
5
Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae).了解全寄生植物的进化:全寄生植物西提那寄生花(西提那科)的完整质体基因组
Ann Bot. 2016 Oct 1;118(5):885-896. doi: 10.1093/aob/mcw135.
6
Single-copy nuclear genes place haustorial Hydnoraceae within piperales and reveal a cretaceous origin of multiple parasitic angiosperm lineages.单拷贝核基因将吸器Hydnoraceae 置于胡椒目中,并揭示了多个寄生被子植物谱系的白垩纪起源。
PLoS One. 2013 Nov 12;8(11):e79204. doi: 10.1371/journal.pone.0079204. eCollection 2013.
7
Identification and characterization of RcMADS1, an AGL24 ortholog from the holoparasitic plant Rafflesia cantleyi Solms-Laubach (Rafflesiaceae).鉴定和表征 holoparasitic 植物 RcMADS1,它是 Rafflesia cantleyi Solms-Laubach(Rafflesiaceae)的 AGL24 直系同源物。
PLoS One. 2013 Jun 28;8(6):e67243. doi: 10.1371/journal.pone.0067243. Print 2013.
8
Parasitic plants have increased rates of molecular evolution across all three genomes.寄生植物在三个基因组中都有较高的分子进化速率。
BMC Evol Biol. 2013 Jun 19;13:126. doi: 10.1186/1471-2148-13-126.
9
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Ann Bot. 2012 Nov;110(6):1137-47. doi: 10.1093/aob/mcs197. Epub 2012 Sep 21.
10
Diversification of land plants: insights from a family-level phylogenetic analysis.陆地植物的多样化:来自家族水平系统发育分析的见解。
BMC Evol Biol. 2011 Nov 21;11:341. doi: 10.1186/1471-2148-11-341.
Nucleic Acids Res. 1993 Jul 1;21(13):3025-49. doi: 10.1093/nar/21.13.3025.
4
From field to film: rapid sequencing methods for field-collected plant species.从田间到胶片:针对野外采集植物物种的快速测序方法
Biotechniques. 1994 Mar;16(3):470-5.
5
Molecular drive: a cohesive mode of species evolution.分子驱动:物种进化的一种凝聚模式。
Nature. 1982 Sep 9;299(5879):111-7. doi: 10.1038/299111a0.
6
Springcleaning ribosomal DNA: a model for multigene evolution?核糖体DNA的春季大扫除:多基因进化的一个模型?
Nature. 1981 Apr 30;290(5809):731-2. doi: 10.1038/290731a0.
7
Fidelity of mammalian DNA polymerases.哺乳动物DNA聚合酶的保真度。
Science. 1981 Aug 14;213(4509):765-7. doi: 10.1126/science.6454965.
8
Cloning and sequencing of the ribosomal RNA genes in maize: the 17S region.玉米核糖体RNA基因的克隆与测序:17S区域
DNA. 1984;3(1):31-40. doi: 10.1089/dna.1.1984.3.31.
9
Molecular evidence for genetic exchanges among ribosomal genes on nonhomologous chromosomes in man and apes.人类和猿类非同源染色体上核糖体基因间发生基因交换的分子证据。
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7323-7. doi: 10.1073/pnas.77.12.7323.
10
Comparison of the nucleotide sequence of soybean 18S rRNA with the sequences of other small-subunit rRNAs.大豆18S rRNA核苷酸序列与其他小亚基rRNA序列的比较。
J Mol Evol. 1984;21(3):259-69. doi: 10.1007/BF02102358.