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大肠杆菌谷氧还蛋白(C14S)与谷胱甘肽之间混合二硫键的核磁共振溶液结构。

The nuclear magnetic resonance solution structure of the mixed disulfide between Escherichia coli glutaredoxin(C14S) and glutathione.

作者信息

Bushweller J H, Billeter M, Holmgren A, Wüthrich K

机构信息

Institut für Molekularbiologie und Biophysik, Eidgenössische Technische Hochschule-Hönggerberg, Zürich, Switzerland.

出版信息

J Mol Biol. 1994 Feb 4;235(5):1585-97. doi: 10.1006/jmbi.1994.1108.

Abstract

The determination of the nuclear magnetic resonance (NMR) solution structured of the mixed disulfide between the mutant Escherichia coli glutaredoxin Grx(C14S) and glutathione (GSH), Grx(C14S)-SG, is described, the binding site for GSH on Grx(C14S) is located, and the non-bonding interactions between -SG and the protein are characterized. Based on nearly complete sequence-specific NMR assignments, 1010 nuclear Overhauser enhancement upper distance constraints and 116 dihedral angle constraints were obtained as the input for the structure calculations, for which the distance geometry program DIANA was used followed by energy minimization in a waterbath with the AMBER force field in the program OPAL. The -SG moiety was found to be localized on the surface of the protein in a cleft bounded by the amino acid residues Y13, T58, V59, Y72, T73 and D74. Hydrogen bonds have been identified between -SG and the residues V59 and T73 of Grx(C14S), and the formation of an additional hydrogen bond with Y72 and electrostatic interactions with the side-chains of D74 and K45 are also compatible with the NMR conformational constraints. Comparison of the reduced and oxidized forms of Grx with Grx(C14S)-SG shows that the mixed disulfide more closely resembles the oxidized form of the protein. Functional implications of this observation are discussed. Comparisons are also made with the related proteins bacteriophage T4 glutaredoxin and glutathione S-transferase.

摘要

本文描述了突变型大肠杆菌谷氧还蛋白Grx(C14S)与谷胱甘肽(GSH)之间混合二硫键Grx(C14S)-SG的核磁共振(NMR)溶液结构的测定,确定了GSH在Grx(C14S)上的结合位点,并对-SG与蛋白质之间的非键相互作用进行了表征。基于几乎完整的序列特异性NMR归属,获得了1010个核Overhauser增强上限距离约束和116个二面角约束作为结构计算的输入,结构计算使用距离几何程序DIANA,随后在OPAL程序中采用AMBER力场在水浴中进行能量最小化。发现-SG部分位于蛋白质表面的一个裂隙中,该裂隙由氨基酸残基Y13、T58、V59、Y72、T73和D74界定。已确定-SG与Grx(C14S)的残基V59和T73之间存在氢键,与Y72形成额外氢键以及与D74和K45侧链的静电相互作用也符合NMR构象约束。Grx的还原形式和氧化形式与Grx(C14S)-SG的比较表明,混合二硫键更类似于蛋白质的氧化形式。讨论了这一观察结果的功能意义。还与相关蛋白质噬菌体T4谷氧还蛋白和谷胱甘肽S-转移酶进行了比较。

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