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1
Transposase A binding sites in the attachment sites of bacteriophage Mu that are essential for the activity of the enhancer and A binding sites that promote transposition towards Fpro-lac.噬菌体Mu附着位点中的转座酶A结合位点,这些位点对于增强子活性至关重要,以及促进向Fpro-lac转座的A结合位点。
Nucleic Acids Res. 1994 Mar 11;22(5):773-9. doi: 10.1093/nar/22.5.773.
2
Role of the A protein-binding sites in the in vitro transposition of mu DNA. A complex circuit of interactions involving the mu ends and the transpositional enhancer.A蛋白结合位点在μDNA体外转座中的作用。涉及μ末端和转座增强子的复杂相互作用回路。
J Biol Chem. 1992 Oct 5;267(28):19963-70.
3
DNA-protein cooperativity in the assembly and stabilization of mu strand transfer complex. Relevance of DNA phasing and att site cleavage.μ链转移复合物组装与稳定过程中的DNA-蛋白质协同作用。DNA相位和att位点切割的相关性。
J Mol Biol. 1994 May 13;238(4):514-27. doi: 10.1006/jmbi.1994.1311.
4
The wing of the enhancer-binding domain of Mu phage transposase is flexible and is essential for efficient transposition.Mu噬菌体转座酶增强子结合结构域的侧翼是灵活的,对高效转座至关重要。
Proc Natl Acad Sci U S A. 1996 Feb 6;93(3):1146-50. doi: 10.1073/pnas.93.3.1146.
5
Inhibition of bacteriophage Mu transposition by Mu repressor and Fis.Mu阻遏蛋白和Fis对噬菌体Mu转座的抑制作用
Mol Microbiol. 1993 Oct;10(2):293-8. doi: 10.1111/j.1365-2958.1993.tb01955.x.
6
Efficient Mu transposition requires interaction of transposase with a DNA sequence at the Mu operator: implications for regulation.高效的Mu转座需要转座酶与Mu操纵子处的DNA序列相互作用:对调控的影响。
Cell. 1989 Jul 28;58(2):399-408. doi: 10.1016/0092-8674(89)90854-4.
7
Conformational isomerization in phage Mu transpososome assembly: effects of the transpositional enhancer and of MuB.噬菌体Mu转座体组装中的构象异构化:转座增强子和MuB的作用。
EMBO J. 2001 Dec 3;20(23):6927-35. doi: 10.1093/emboj/20.23.6927.
8
Enhancer-independent variants of phage Mu transposase: enhancer-specific stimulation of catalytic activity by a partner transposase.噬菌体Mu转座酶的非增强子依赖性变体:伴侣转座酶对催化活性的增强子特异性刺激
Genes Dev. 1995 Oct 15;9(20):2545-55. doi: 10.1101/gad.9.20.2545.
9
DNase protection analysis of the stable synaptic complexes involved in Mu transposition.
Proc Natl Acad Sci U S A. 1991 Oct 15;88(20):9031-5. doi: 10.1073/pnas.88.20.9031.
10
DNA-protein complexes during attachment-site synapsis in Mu DNA transposition.在Mu DNA转座过程中附着位点联会期间的DNA-蛋白质复合物
EMBO J. 1991 Jun;10(6):1585-91. doi: 10.1002/j.1460-2075.1991.tb07679.x.

引用本文的文献

1
Core and accessory genome architecture in a group of Pseudomonas aeruginosa Mu-like phages.一组铜绿假单胞菌Mu样噬菌体的核心和辅助基因组结构
BMC Genomics. 2014 Dec 19;15(1):1146. doi: 10.1186/1471-2164-15-1146.

本文引用的文献

1
The products of gene A of the related phages Mu and D108 differ in their specificities.相关噬菌体Mu和D108的基因A产物在特异性上有所不同。
Mol Gen Genet. 1983;190(1):70-9. doi: 10.1007/BF00330326.
2
Site-specific recognition of the bacteriophage Mu ends by the Mu A protein.噬菌体Mu末端由Mu A蛋白进行位点特异性识别。
Cell. 1984 Dec;39(2 Pt 1):387-94. doi: 10.1016/0092-8674(84)90017-5.
3
Rapid and efficient site-specific mutagenesis without phenotypic selection.无需表型筛选的快速高效位点特异性诱变。
Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92. doi: 10.1073/pnas.82.2.488.
4
Transpososomes: stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA.转座体:参与噬菌体Mu DNA体外转座的稳定蛋白质-DNA复合物。
Cell. 1987 Apr 24;49(2):253-62. doi: 10.1016/0092-8674(87)90566-6.
5
Transposition of mini-Mu containing only one of the ends of bacteriophage Mu.仅包含噬菌体Mu一端的微型Mu转座。
EMBO J. 1986 Dec 20;5(13):3687-90. doi: 10.1002/j.1460-2075.1986.tb04700.x.
6
Analysis of the ends of bacteriophage Mu using site-directed mutagenesis.利用定点诱变技术对噬菌体Mu的末端进行分析。
J Mol Biol. 1986 Jun 20;189(4):597-602. doi: 10.1016/0022-2836(86)90490-0.
7
DNA sequence of the control region of phage D108: the N-terminal amino acid sequences of repressor and transposase are similar both in phage D108 and in its relative, phage Mu.噬菌体D108调控区的DNA序列:在噬菌体D108及其亲缘噬菌体Mu中,阻遏蛋白和转座酶的N端氨基酸序列相似。
Nucleic Acids Res. 1986 May 12;14(9):3813-25. doi: 10.1093/nar/14.9.3813.
8
A defined system for the DNA strand-transfer reaction at the initiation of bacteriophage Mu transposition: protein and DNA substrate requirements.噬菌体Mu转座起始时DNA链转移反应的一个明确系统:蛋白质和DNA底物要求。
Proc Natl Acad Sci U S A. 1985 Nov;82(22):7570-4. doi: 10.1073/pnas.82.22.7570.
9
Mechanism of transposition of bacteriophage Mu: structure of a transposition intermediate.噬菌体Mu转座机制:转座中间体的结构
Cell. 1985 Jul;41(3):867-76. doi: 10.1016/s0092-8674(85)80067-2.
10
DNA sequences at the ends of the genome of bacteriophage Mu essential for transposition.噬菌体Mu基因组末端对于转座至关重要的DNA序列。
Proc Natl Acad Sci U S A. 1985 Apr;82(7):2087-91. doi: 10.1073/pnas.82.7.2087.

噬菌体Mu附着位点中的转座酶A结合位点,这些位点对于增强子活性至关重要,以及促进向Fpro-lac转座的A结合位点。

Transposase A binding sites in the attachment sites of bacteriophage Mu that are essential for the activity of the enhancer and A binding sites that promote transposition towards Fpro-lac.

作者信息

van Drunen C M, Mientjes E, van Zuylen O, van de Putte P, Goosen N

机构信息

Laboratory of Molecular Genetics, Gorlaeus Laboratories, Leiden University, The Netherlands.

出版信息

Nucleic Acids Res. 1994 Mar 11;22(5):773-9. doi: 10.1093/nar/22.5.773.

DOI:10.1093/nar/22.5.773
PMID:8139917
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC307881/
Abstract

In this paper we determine which of the A binding sites in the attachment sites of phage Mu are required for the stimulatory activity of the transpositional enhancer (IAS). For this purpose the transposition frequencies of mini-Mu's with different truncated attachment sites to an Ftet target were measured both in the presence and the absence of the IAS. The results show that in our in vivo assay the L3 and R3 sites are dispensable for functioning of the IAS. An additional deletion of L2 or R2 however abolishes the stimulating activity of the enhancer suggesting an interaction between A molecules bound to these sites and the IAS. The residual transposition activity of a IAS-containing mini Mu in which R2 (and R3) are deleted is much lower than the activity of the comparable construct without the IAS. This means that in the absence of R2 the IAS is inhibiting transposition. Such an inhibition is not observed when L2 (and L3) are deleted. This suggests that the IAS interacts with the attachment sites in an ordered fashion, first with attL and then with attR. Furthermore we show that mini-Mu transposition is enhanced when Fpro-lac is used as a target instead of Ftet. We show that this elevated transposition is dependent on the Mu A binding sites L2,L3 and R2. These sequences could possibly mediate an interaction between the mini-Mu plasmid and sequences present on Fpro-lac.

摘要

在本文中,我们确定了噬菌体Mu附着位点中的哪些A结合位点是转座增强子(IAS)刺激活性所必需的。为此,在有和没有IAS的情况下,测量了具有不同截短附着位点的微型Mu到Ftet靶标的转座频率。结果表明,在我们的体内试验中,L3和R3位点对于IAS的功能是可有可无的。然而,额外缺失L2或R2会消除增强子的刺激活性,这表明与这些位点结合的A分子与IAS之间存在相互作用。在缺失R2(和R3)的含IAS微型Mu中,其残余转座活性远低于不含IAS的可比构建体的活性。这意味着在没有R2的情况下,IAS会抑制转座。当缺失L2(和L3)时,未观察到这种抑制作用。这表明IAS以有序的方式与附着位点相互作用,首先与attL相互作用,然后与attR相互作用。此外,我们表明,当使用Fpro-lac作为靶标而不是Ftet时,微型Mu转座会增强。我们表明,这种转座增强依赖于Mu A结合位点L2、L3和R2。这些序列可能介导微型Mu质粒与Fpro-lac上存在的序列之间的相互作用。