• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌Ada蛋白DNA甲基磷酸三酯修复结构域的溶液结构

Solution structure of the DNA methyl phosphotriester repair domain of Escherichia coli Ada.

作者信息

Myers L C, Verdine G L, Wagner G

机构信息

Department of Chemistry, Harvard University, Cambridge, Massachusetts 02138.

出版信息

Biochemistry. 1993 Dec 28;32(51):14089-94. doi: 10.1021/bi00214a003.

DOI:10.1021/bi00214a003
PMID:8260490
Abstract

The Escherichia coli Ada protein repairs methyl phosphotriesters in DNA by direct, irreversible methyl transfer to one of its own cysteine residues. The methyl-transfer process appears to be autocatalyzed by coordination of the acceptor residue, Cys-69, to a tightly bound zinc ion. Upon methyl transfer, Ada acquires the ability to bind DNA sequence-specifically and thereby to induce genes that confer resistance to methylating agents. The solution structure of an N-terminal 10-kDa fragment of Ada, which retains zinc binding and DNA methyl phosphotriester repair activities, was determined using multidimensional heteronuclear nuclear magnetic resonance techniques. The structure reveals a zinc-binding motif unlike any observed thus far in transcription factors or zinc-containing enzymes and provides insight into the mechanism of metalloactivated DNA repair.

摘要

大肠杆菌Ada蛋白通过将甲基直接不可逆地转移到自身的一个半胱氨酸残基上来修复DNA中的甲基磷酸三酯。甲基转移过程似乎是由受体残基Cys-69与紧密结合的锌离子配位自动催化的。甲基转移后,Ada获得了序列特异性结合DNA的能力,从而诱导赋予对甲基化剂抗性的基因。使用多维异核核磁共振技术确定了Ada N端10 kDa片段的溶液结构,该片段保留了锌结合和DNA甲基磷酸三酯修复活性。该结构揭示了一种不同于迄今为止在转录因子或含锌酶中观察到的锌结合基序,并为金属激活的DNA修复机制提供了深入了解。

相似文献

1
Solution structure of the DNA methyl phosphotriester repair domain of Escherichia coli Ada.大肠杆菌Ada蛋白DNA甲基磷酸三酯修复结构域的溶液结构
Biochemistry. 1993 Dec 28;32(51):14089-94. doi: 10.1021/bi00214a003.
2
Repair of DNA methylphosphotriesters through a metalloactivated cysteine nucleophile.通过金属激活的半胱氨酸亲核试剂修复DNA甲基磷酸三酯。
Science. 1993 Aug 27;261(5125):1164-7. doi: 10.1126/science.8395079.
3
Backbone dynamics, amide hydrogen exchange, and resonance assignments of the DNA methylphosphotriester repair domain of Escherichia coli Ada using NMR.利用核磁共振技术对大肠杆菌Ada的DNA甲基磷酸三酯修复结构域进行主链动力学、酰胺氢交换及共振归属研究。
Biochemistry. 1996 Jul 23;35(29):9335-48. doi: 10.1021/bi952524v.
4
The solution structure of the methylated form of the N-terminal 16-kDa domain of Escherichia coli Ada protein.大肠杆菌Ada蛋白N端16 kDa结构域甲基化形式的溶液结构
Protein Sci. 2006 Mar;15(3):487-97. doi: 10.1110/ps.051786306. Epub 2006 Feb 1.
5
Chemical communication across the zinc tetrathiolate cluster in Escherichia coli Ada, a metalloactivated DNA repair protein.大肠杆菌Ada(一种金属激活的DNA修复蛋白)中通过四硫醇锌簇进行的化学通讯。
Biochemistry. 2001 Sep 25;40(38):11596-603. doi: 10.1021/bi011001m.
6
Structural basis for the functional switch of the E. coli Ada protein.大肠杆菌Ada蛋白功能转换的结构基础。
Biochemistry. 2001 Apr 10;40(14):4261-71. doi: 10.1021/bi002109p.
7
Zinc binding by the methylation signaling domain of the Escherichia coli Ada protein.大肠杆菌Ada蛋白甲基化信号结构域与锌的结合
Biochemistry. 1992 May 19;31(19):4541-7. doi: 10.1021/bi00134a002.
8
Metal-coordination sphere in the methylated Ada protein-DNA co-complex.
Chem Biol. 1994 Oct;1(2):91-7. doi: 10.1016/1074-5521(94)90046-9.
9
Metal dependence of transcriptional switching in Escherichia coli Ada.
J Biol Chem. 1995 Mar 24;270(12):6664-70. doi: 10.1074/jbc.270.12.6664.
10
Sequence-specific DNA recognition of the Escherichia coli Ada protein associated with the methylation-dependent functional switch for transcriptional regulation.大肠杆菌Ada蛋白的序列特异性DNA识别与转录调控的甲基化依赖性功能开关相关。
J Biochem. 1995 Dec;118(6):1184-91. doi: 10.1093/oxfordjournals.jbchem.a125005.

引用本文的文献

1
The Acinetobacter baumannii Znu System Overcomes Host-Imposed Nutrient Zinc Limitation.鲍曼不动杆菌的 Znu 系统克服了宿主施加的营养锌限制。
Infect Immun. 2019 Nov 18;87(12). doi: 10.1128/IAI.00746-19. Print 2019 Dec.
2
Classification of the treble clef zinc finger: noteworthy lessons for structure and function evolution.高音谱号锌指分类:结构和功能演化的重要启示。
Sci Rep. 2016 Aug 26;6:32070. doi: 10.1038/srep32070.
3
Minimal functional sites allow a classification of zinc sites in proteins.最小功能位点允许对蛋白质中的锌位点进行分类。
PLoS One. 2011;6(10):e26325. doi: 10.1371/journal.pone.0026325. Epub 2011 Oct 17.
4
Direct measurements of the mechanical stability of zinc-thiolate bonds in rubredoxin by single-molecule atomic force microscopy.通过单分子原子力显微镜直接测量 rubredoxin 中锌-巯基键的机械稳定性。
Biophys J. 2011 Sep 21;101(6):1467-73. doi: 10.1016/j.bpj.2011.08.021. Epub 2011 Sep 20.
5
Multifaceted roles of alkyltransferase and related proteins in DNA repair, DNA damage, resistance to chemotherapy, and research tools.烷基转移酶及相关蛋白在 DNA 修复、DNA 损伤、化疗耐药性及研究工具中的多方面作用。
Chem Res Toxicol. 2011 May 16;24(5):618-39. doi: 10.1021/tx200031q. Epub 2011 Apr 28.
6
Applications of Tripodal [S(3)] and [Se(3)] L(2)X Donor Ligands to Zinc, Cadmium and Mercury Chemistry: Organometallic and Bioinorganic Perspectives.三脚架型[S(3)]和[Se(3)] L(2)X供体配体在锌、镉和汞化学中的应用:有机金属和生物无机视角
New J Chem. 2007;31(12):1996-2014. doi: 10.1039/b712012e.
7
Getting a handle on the role of coenzyme M in alkene metabolism.掌握辅酶M在烯烃代谢中的作用。
Microbiol Mol Biol Rev. 2008 Sep;72(3):445-56. doi: 10.1128/MMBR.00005-08.
8
Direct reversal of DNA alkylation damage.DNA烷基化损伤的直接逆转
Chem Rev. 2006 Feb;106(2):215-32. doi: 10.1021/cr0404702.
9
The solution structure of the methylated form of the N-terminal 16-kDa domain of Escherichia coli Ada protein.大肠杆菌Ada蛋白N端16 kDa结构域甲基化形式的溶液结构
Protein Sci. 2006 Mar;15(3):487-97. doi: 10.1110/ps.051786306. Epub 2006 Feb 1.
10
1H, 13C and 15N resonance assignments of the N-terminal 16 kDa domain of Escherichia coli Ada protein.大肠杆菌Ada蛋白N端16 kDa结构域的1H、13C和15N共振归属
J Biomol NMR. 2004 Jul;29(3):447-8. doi: 10.1023/B:JNMR.0000032549.04619.87.