Spacciapoli P, Nossal N G
Laboratory of Biochemical Pharmacology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892.
J Biol Chem. 1994 Jan 7;269(1):438-46.
The bacteriophage T4 DNA polymerase mutant A737V (tsL141 and tsCB120) was originally characterized as temperature-sensitive for DNA replication and an antimutator for transition mutations. Its antimutator phenotype is suppressed by the L771F mutation (Reha-Krantz, L. J., Stocki, S., Nonay, R., and Maughan, C. (1989) J. Cell. Biochem. 13D, 140). We find that the A737V polymerase arrests much more frequently than the wild type when polymerizing on primed single-stranded DNA templates. Although the 3'-->5' exonuclease of the mutant is indistinguishable from the wild type on single-stranded DNA, it is more active than the wild type on duplex DNA. In a single encounter with the primer, the wild type polymerase can incorporate more than 50 nucleotides. The processivity of the A737V polymerase is less than the wild type as a polymerase, but is greater than the wild type as an exonuclease. The L771F polymerase resembles the wild type in each of these properties, while the double mutant (A737V, L771F) is intermediate between the two single mutants. Kinetic studies of wild type T4 DNA polymerase (Capson, T. L., Peliska, J. A., Kaboord, B. F., Frey, M. W., Lively, C., Dahlberg, M., and Benkovic, S. J. (1992) Biochemistry 31, 10984-10994) suggest that DNA binds first to the polumerase active site, before adopting a configuration in which it can be hydrolyzed by the exonuclease. Within this framework, our studies suggest that DNA moves more readily from the polymerase- to the exonuclease-competent configuration on the A737V mutant polymerase, and that this movement is decreased by the compensating L771F mutation.
噬菌体T4 DNA聚合酶突变体A737V(tsL141和tsCB120)最初被鉴定为对DNA复制具有温度敏感性,并且对转换突变具有抗突变作用。其抗突变表型被L771F突变所抑制(雷哈-克兰茨,L. J.,斯托基,S.,诺奈,R.,和莫恩,C.(1989年)《细胞生物化学杂志》13D,140)。我们发现,A737V聚合酶在引发的单链DNA模板上聚合时比野生型更频繁地停滞。尽管该突变体的3'→5'核酸外切酶在单链DNA上与野生型没有区别,但在双链DNA上比野生型更具活性。在与引物的单次接触中,野生型聚合酶可以掺入超过50个核苷酸。作为聚合酶,A737V聚合酶的持续合成能力低于野生型,但作为核酸外切酶则高于野生型。L771F聚合酶在这些特性中的每一个方面都类似于野生型,而双突变体(A737V,L771F)则介于两个单突变体之间。对野生型T4 DNA聚合酶的动力学研究(卡普森,T. L.,佩利斯卡,J. A.,卡博德,B. F.,弗雷,M. W.,利夫利,C.,达尔伯格,M.,和本科维奇,S. J.(1992年)《生物化学》31,10984 - 10994)表明,DNA首先结合到聚合酶活性位点,然后才采取一种可以被核酸外切酶水解的构象。在此框架内,我们的研究表明,DNA在A737V突变体聚合酶上更容易从具有聚合酶活性的构象转变为具有核酸外切酶活性的构象,并且这种转变会因补偿性的L771F突变而减少。