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膜中脂类-蛋白质相互作用的分子模型:疏水错配的作用。

A molecular model for lipid-protein interaction in membranes: the role of hydrophobic mismatch.

作者信息

Fattal D R, Ben-Shaul A

机构信息

Institute of Advanced Studies, Hebrew University of Jerusalem, Israel.

出版信息

Biophys J. 1993 Nov;65(5):1795-809. doi: 10.1016/S0006-3495(93)81249-9.

Abstract

The interaction free energy between a hydrophobic, transmembrane, protein and the surrounding lipid environment is calculated based on a microscopic model for lipid organization. The protein is treated as a rigid hydrophobic solute of thickness dP, embedded in a lipid bilayer of unperturbed thickness doL. The lipid chains in the immediate vicinity of the protein are assumed to adjust their length to that of the protein (e.g., they are stretched when dP > doL) in order to bridge over the lipid-protein hydrophobic mismatch (dP-doL). The bilayer's hydrophobic thickness is assumed to decay exponentially to its asymptotic, unperturbed, value. The lipid deformation free energy is represented as a sum of chain (hydrophobic core) and interfacial (head-group region) contributions. The chain contribution is calculated using a detailed molecular theory of chain packing statistics, which allows the calculation of conformational properties and thermodynamic functions (in a mean-field approximation) of the lipid tails. The tails are treated as single chain amphiphiles, modeled using the rotational isometric state scheme. The interfacial free energy is represented by a phenomenological expression, accounting for the opposing effects of head-group repulsions and hydrocarbon-water surface tension. The lipid deformation free energy delta F is calculated as a function of dP-doL. Most calculations are for C14 amphiphiles which, in the absence of a protein, pack at an average area per head-group ao approximately equal to 32 A2 (doL approximately 24.5 A), corresponding to the fluid state of the membrane. When dP = doL, delta F > 0 and is due entirely to the loss of conformational entropy experienced by the chains around the protein. When dP > doL, the interaction free energy is further increased due to the enhanced stretching of the tails. When dP < doL, chain flexibility (entropy) increases, but this contribution to delta F is overcounted by the increase in the interfacial free energy. Thus, delta F obtains a minimum at dP-doL approximately 0. These qualitative interpretations are supported by detailed numerical calculations of the various contributions to the interaction free energy, and of chain conformational properties. The range of the perturbation of lipid order extends typically over few molecular diameters. A rather detailed comparison of our approach to other models is provided in the discussion.

摘要

基于脂质组织的微观模型,计算了疏水性跨膜蛋白与周围脂质环境之间的相互作用自由能。蛋白质被视为厚度为dP的刚性疏水溶质,嵌入未受扰动厚度为doL的脂质双层中。假定蛋白质紧邻区域的脂质链会将其长度调整为与蛋白质相同(例如,当dP>doL时它们会被拉伸),以便弥合脂质 - 蛋白质疏水错配(dP - doL)。假定双层的疏水厚度呈指数衰减至其渐近的、未受扰动的值。脂质变形自由能表示为链(疏水核心)和界面(头基区域)贡献的总和。链的贡献使用链堆积统计的详细分子理论进行计算,该理论允许计算脂质尾部的构象性质和热力学函数(在平均场近似下)。尾部被视为单链两亲分子,使用旋转异构体状态方案进行建模。界面自由能由一个唯象表达式表示,该表达式考虑了头基排斥和烃 - 水表面张力的相反作用。脂质变形自由能ΔF作为dP - doL的函数进行计算。大多数计算针对的是C14两亲分子,在没有蛋白质的情况下,每个头基的平均面积ao约为32 Ų(doL约为24.5 Å),对应于膜的流体状态。当dP = doL时,ΔF>0,且完全归因于蛋白质周围链所经历的构象熵损失。当dP>doL时,由于尾部拉伸增强,相互作用自由能进一步增加。当dP<doL时,链的柔韧性(熵)增加,但对ΔF的这一贡献被界面自由能的增加所高估。因此,ΔF在dP - doL约为0时取得最小值。这些定性解释得到了对相互作用自由能各种贡献以及链构象性质的详细数值计算的支持。脂质有序扰动的范围通常延伸几个分子直径。在讨论中提供了我们的方法与其他模型的相当详细的比较。

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