Suppr超能文献

脂双层中链堆积和构象统计的平均场计算:与实验和分子动力学研究的比较。

Mean-field calculations of chain packing and conformational statistics in lipid bilayers: comparison with experiments and molecular dynamics studies.

作者信息

Fattal D R, Ben-Shaul A

机构信息

Department of Physical Chemistry, Fritz Haber Research Center, Hebrew University of Jerusalem, Israel.

出版信息

Biophys J. 1994 Sep;67(3):985-95.

Abstract

A molecular, mean-field theory of chain packing statistics in aggregates of amphiphilic molecules is applied to calculate the conformational properties of the lipid chains comprising the hydrophobic cores of dipalmitoyl-phosphatidylcholine (DPPC), dioleoyl-phosphatidylcholine (DOPC), and palmitoyl-oleoyl-phosphatidylcholine (POPC) bilayers in their fluid state. The central quantity in this theory, the probability distribution of chain conformations, is evaluated by minimizing the free energy of the bilayer assuming only that the segment density within the hydrophobic region is uniform (liquidlike). Using this distribution we calculate chain conformational properties such as bond orientational order parameters and spatial distributions of the various chain segments. The lipid chains, both the saturated palmitoyl (-(CH2)14-CH3) and the unsaturated oleoyl (-(CH2)7-CH = CH-(CH2)7-CH3) chains are modeled using rotational isomeric state schemes. All possible chain conformations are enumerated and their statistical weights are determined by the self-consistency equations expressing the condition of uniform density. The hydrophobic core of the DPPC bilayer is treated as composed of single (palmitoyl) chain amphiphiles, i.e., the interactions between chains originating from the same lipid headgroup are assumed to be the same as those between chains belonging to different molecules. Similarly, the DOPC system is treated as a bilayer of oleoyl chains. The POPC bilayer is modeled as an equimolar mixture of palmitoyl and oleoyl chains. Bond orientational order parameter profiles, and segment spatial distributions are calculated for the three systems above, for several values of the bilayer thickness (or, equivalently, average area/headgroup) chosen, where possible, so as to allow for comparisons with available experimental data and/or molecular dynamics simulations. In most cases the agreement between the mean-field calculations, which are relatively easy to perform, and the experimental and simulation data is very good, supporting their use as an efficient tool for analyzing a variety of systems subject to varying conditions (e.g., bilayers of different compositions or thicknesses at different temperatures).

摘要

一种用于计算两亲分子聚集体中链堆积统计的分子平均场理论,被应用于计算构成二棕榈酰磷脂酰胆碱(DPPC)、二油酰磷脂酰胆碱(DOPC)和棕榈酰油酰磷脂酰胆碱(POPC)双层膜疏水核心的脂质链在其流体状态下的构象性质。该理论的核心量,即链构象的概率分布,是通过假设疏水区域内的链段密度均匀(类似液体)来最小化双层膜的自由能进行评估的。利用这种分布,我们计算链的构象性质,如键取向序参数和各种链段的空间分布。脂质链,无论是饱和的棕榈酰链(-(CH2)14-CH3)还是不饱和的油酰链(-(CH2)7-CH = CH-(CH2)7-CH3),都使用旋转异构体状态方案进行建模。列举了所有可能的链构象,并通过表达密度均匀条件的自洽方程确定它们的统计权重。DPPC双层膜的疏水核心被视为由单链(棕榈酰)两亲分子组成,即假设来自同一脂质头部基团的链间相互作用与属于不同分子的链间相互作用相同。类似地,DOPC系统被视为油酰链双层膜。POPC双层膜被建模为棕榈酰链和油酰链的等摩尔混合物。针对上述三个系统,计算了键取向序参数分布和链段空间分布,对于选定的几个双层膜厚度值(或者等效地,平均面积/头部基团),在可能的情况下,以便与现有的实验数据和/或分子动力学模拟进行比较。在大多数情况下,相对容易进行的平均场计算与实验和模拟数据之间的一致性非常好,这支持了它们作为分析各种不同条件下系统(例如不同组成或厚度的双层膜在不同温度下)的有效工具的用途。

相似文献

8
Pressure-induced ordering in mixed-lipid bilayers.混合脂质双层膜中压力诱导的有序化
Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jan;69(1 Pt 1):011913. doi: 10.1103/PhysRevE.69.011913. Epub 2004 Jan 30.
9
Quantitative Characterization of Cholesterol Partitioning between Binary Bilayers.定量描述双层类脂体中胆固醇的分配。
J Chem Theory Comput. 2018 Jun 12;14(6):2829-2833. doi: 10.1021/acs.jctc.8b00140. Epub 2018 May 14.
10
Effect of high pressure on fully hydrated DPPC and POPC bilayers.高压对完全水合 DPPC 和 POPC 双层膜的影响。
J Phys Chem B. 2011 Feb 10;115(5):1038-44. doi: 10.1021/jp110002q. Epub 2010 Dec 31.

引用本文的文献

7
Stability and phase separation in mixed monopolar lipid/bolalipid layers.混合单极脂质/双脂质层中的稳定性和相分离
Biophys J. 2007 Oct 15;93(8):2609-21. doi: 10.1529/biophysj.106.102764. Epub 2007 Jun 15.

本文引用的文献

5
Structure of fully hydrated bilayer dispersions.完全水合双层分散体的结构。
Biochim Biophys Acta. 1988 Jul 7;942(1):1-10. doi: 10.1016/0005-2736(88)90268-4.
6
Chain molecules at high densities at interfaces.界面处高密度的链状分子。
Annu Rev Phys Chem. 1988;39:425-61. doi: 10.1146/annurev.pc.39.100188.002233.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验