• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

水稻及其他谷类作物核糖体DNA基因间隔区的精细结构与进化

Fine structure and evolution of the rDNA intergenic spacer in rice and other cereals.

作者信息

Cordesse F, Cooke R, Tremousaygue D, Grellet F, Delseny M

机构信息

Laboratoire de Physiologie et Biologie Moléculaire Végétales, URA 565 du Centre National de la Recherche Scientifique, Université de Perpignan, France.

出版信息

J Mol Evol. 1993 Apr;36(4):369-79. doi: 10.1007/BF00182184.

DOI:10.1007/BF00182184
PMID:8315657
Abstract

The intergenic spacer of a rice ribosomal RNA gene repeating unit has been completely sequenced. The spacer contains three imperfect, direct repeated regions of 264-253 bp, followed by a related but more highly divergent region. Detailed analysis of the sequence allows the presentation of an evolutionary scenario in which the 264-253-bp repeats are derived from an ancestral 150-bp sequence by deletion and amplification. Comparison of the rice sequence with those of maize, wheat, and rye shows that, despite considerable divergence from the ancestral sequence, several regions have been highly conserved, suggesting that they may play an important role in the structure and/or expression of the ribosomal genes.

摘要

水稻核糖体RNA基因重复单位的基因间隔区已被完全测序。该间隔区包含三个264 - 253 bp的不完全直接重复区域,随后是一个相关但差异更大的区域。对该序列的详细分析揭示了一种进化情形,即264 - 253 bp的重复序列是通过缺失和扩增从一个150 bp的祖先序列衍生而来。将水稻序列与玉米、小麦和黑麦的序列进行比较表明,尽管与祖先序列有很大差异,但仍有几个区域高度保守,这表明它们可能在核糖体基因的结构和/或表达中发挥重要作用。

相似文献

1
Fine structure and evolution of the rDNA intergenic spacer in rice and other cereals.水稻及其他谷类作物核糖体DNA基因间隔区的精细结构与进化
J Mol Evol. 1993 Apr;36(4):369-79. doi: 10.1007/BF00182184.
2
Structure and evolution of the intergenic region in a ribosomal DNA repeat unit of wheat.小麦核糖体DNA重复单元中基因间区域的结构与进化
J Mol Biol. 1988 May 5;201(1):1-17. doi: 10.1016/0022-2836(88)90434-2.
3
The complete nucleotide sequence of the intergenic spacer between 25S and 17S rDNAs in rice.
Plant Mol Biol. 1990 Dec;15(6):933-5. doi: 10.1007/BF00039432.
4
Physical organization of the 18S and 5S ribosomal RNA genes in the mitochondrial genome of rye (Secale cereale L.).黑麦(Secale cereale L.)线粒体基因组中18S和5S核糖体RNA基因的物理组织。
Curr Genet. 1990 Apr;17(4):339-46. doi: 10.1007/BF00314882.
5
Occurrence of 9 homologous repeat units in the external spacer region of a nuclear maize rRNA gene unit.玉米核rRNA基因单位外部间隔区出现9个同源重复单元。
Nucleic Acids Res. 1986 Jun 25;14(12):4969-86. doi: 10.1093/nar/14.12.4969.
6
A second locus for the 5S multigene family in Secale L.: sequence divergence in two lineages of the family.黑麦属5S多基因家族的第二个位点:该家族两个谱系中的序列分歧
Genome. 1989 Jun;32(3):457-67.
7
Comparative analysis of a recombining-repeat-sequence family in the mitochondrial genomes of wheat (Triticum aestivum L.) and rye (Secale cereale L.).小麦(Triticum aestivum L.)和黑麦(Secale cereale L.)线粒体基因组中一个重组重复序列家族的比较分析。
Curr Genet. 1993 Mar;23(3):255-64. doi: 10.1007/BF00351504.
8
High evolutionary divergence of the 5.8S ribosomal DNA in Mimulus glaucescens (Scrophulariaceae).沟酸浆(玄参科)5.8S核糖体DNA的高度进化分歧
Plant Mol Biol. 1993 Jul;22(4):691-6. doi: 10.1007/BF00047409.
9
The structure of the rDNA intergenic spacer of Avena sativa L.: a comparative study.燕麦(Avena sativa L.)核糖体DNA基因间隔区的结构:一项比较研究。
Plant Mol Biol. 1994 Jul;25(4):751-6. doi: 10.1007/BF00029613.
10
Transcription of tomato ribosomal DNA and the organization of the intergenic spacer.番茄核糖体DNA的转录及基因间隔区的组织
Mol Gen Genet. 1990 Mar;221(1):103-12. doi: 10.1007/BF00280374.

引用本文的文献

1
The Ribosomal DNA Loci of the Ancient Monocot L. (Araceae) Contain Different Variants of the 35S and 5S Ribosomal RNA Gene Units.古老单子叶植物石柑属(天南星科)的核糖体DNA位点包含35S和5S核糖体RNA基因单位的不同变体。
Front Plant Sci. 2022 Mar 3;13:819750. doi: 10.3389/fpls.2022.819750. eCollection 2022.
2
Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.植物核糖体生物发生:从功能性 45S 核糖体 DNA 组织到核糖体组装因子。
Plant Cell. 2019 Sep;31(9):1945-1967. doi: 10.1105/tpc.18.00874. Epub 2019 Jun 25.
3
Cytomolecular Analysis of Ribosomal DNA Evolution in a Natural Allotetraploid and Its Putative Ancestors-Dissecting Complex Repetitive Structure of Intergenic Spacers.

本文引用的文献

1
Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.植物核糖体 RNA 基因:拷贝数和基因间间隔的可变性。
Plant Mol Biol. 1987 Sep;9(5):509-20. doi: 10.1007/BF00015882.
2
Isolation and characterization of an unusual repeated sequence from the ribosomal intergenic spacer of the crucifer Sisymbrium irio.从十字花科植物播娘蒿核糖体基因间隔区中分离出一个不寻常的重复序列。
Plant Mol Biol. 1989 Jun;12(6):695-706. doi: 10.1007/BF00044160.
3
Ribosomal gene spacer length variability in cultivated and wild rice species.
天然异源四倍体及其假定祖先核糖体DNA进化的细胞分子分析——剖析基因间隔区的复杂重复结构
Front Plant Sci. 2016 Oct 14;7:1499. doi: 10.3389/fpls.2016.01499. eCollection 2016.
4
Diversity and Inheritance of Intergenic Spacer Sequences of 45S Ribosomal DNA among Accessions of Brassica oleracea L. var. capitata.甘蓝变种(Brassica oleracea L. var. capitata)不同种质中45S核糖体DNA基因间隔区序列的多样性与遗传特性
Int J Mol Sci. 2015 Dec 3;16(12):28783-99. doi: 10.3390/ijms161226125.
5
Incomplete sequence homogenization in 45S rDNA multigene families: intermixed IGS heterogeneity within the single NOR locus of the polyploid species Medicago arborea (Fabaceae).45S核糖体DNA多基因家族中的序列不完全同质化:多倍体物种木本苜蓿(豆科)单个核仁组织区位点内的间隔区异质性混合情况
Ann Bot. 2014 Aug;114(2):243-51. doi: 10.1093/aob/mcu115. Epub 2014 Jun 12.
6
Molecular organization of the 25S-18S rDNA IGS of Fagus sylvatica and Quercus suber: a comparative analysis.欧洲山毛榉和栓皮栎 25S-18S rDNA IGS 的分子组织:比较分析。
PLoS One. 2014 Jun 3;9(6):e98678. doi: 10.1371/journal.pone.0098678. eCollection 2014.
7
Cloning and analysis of a 6.8-kb rDNA intergenic spacer region of the European ash (Fraxinus excelsior L.).克隆和分析欧洲白蜡(Fraxinus excelsior L.)的 6.8kb rDNA 基因间间隔区。
Theor Appl Genet. 1996 Jun;92(8):1003-8. doi: 10.1007/BF00224041.
8
Nuclear ribosomal spacer regions in plant phylogenetics: problems and prospects.植物系统发育学中的核核糖体间隔区:问题与展望。
Mol Biol Rep. 2010 Apr;37(4):1897-912. doi: 10.1007/s11033-009-9630-3. Epub 2009 Jul 21.
9
Nucleotide sequence, structural organization and length heterogeneity of ribosomal DNA intergenic spacer in Quercus petraea (Matt.) Liebl. and Q. robur L.岩生栎(Matt.)Liebl.和欧洲栓皮栎L.核糖体DNA基因间隔区的核苷酸序列、结构组织及长度异质性
Mol Genet Genomics. 2009 Feb;281(2):207-21. doi: 10.1007/s00438-008-0404-8. Epub 2008 Dec 4.
10
Dropout alignment allows homology recognition and evolutionary analysis of rDNA intergenic spacers.缺失比对可实现核糖体DNA基因间隔区的同源性识别及进化分析。
J Mol Evol. 2008 Apr;66(4):368-83. doi: 10.1007/s00239-008-9090-8. Epub 2008 Mar 25.
栽培稻和野生稻种核糖体基因间隔区长度变异性。
Theor Appl Genet. 1990 Jan;79(1):81-8. doi: 10.1007/BF00223791.
4
Genome specificity of rDNA spacer fragments from Oryza sativa L.水稻 rDNA 间隔片段的基因组特异性
Theor Appl Genet. 1992 Apr;83(6-7):864-70. doi: 10.1007/BF00226709.
5
Molecular coevolution: DNA divergence and the maintenance of function.分子共同进化:DNA 分歧与功能维持
Cell. 1984 Oct;38(3):622-3. doi: 10.1016/0092-8674(84)90255-1.
6
The complete nucleotide sequence of a rice 17S rRNA gene.水稻17S核糖体RNA基因的完整核苷酸序列。
Nucleic Acids Res. 1984 Jul 11;12(13):5441-8. doi: 10.1093/nar/12.13.5441.
7
Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.超螺旋测序:一种用于质粒DNA测序的快速简便方法。
DNA. 1985 Apr;4(2):165-70. doi: 10.1089/dna.1985.4.165.
8
Preferential homogenization between adjacent and alternate subrepeats in wheat rDNA.小麦核糖体DNA中相邻和交替亚重复序列之间的优先均质化。
Nucleic Acids Res. 1986 Jul 11;14(13):5499-512. doi: 10.1093/nar/14.13.5499.
9
The structure of the maize ribosomal DNA spacer region.玉米核糖体DNA间隔区的结构。
Nucleic Acids Res. 1986 Jun 25;14(12):4953-68. doi: 10.1093/nar/14.12.4953.
10
Transcription of cloned eukaryotic ribosomal RNA genes.克隆真核生物核糖体RNA基因的转录
Annu Rev Biochem. 1986;55:801-30. doi: 10.1146/annurev.bi.55.070186.004101.