• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质中的可移动叶和柔性环。控制生化活性的结构变形。

Movable lobes and flexible loops in proteins. Structural deformations that control biochemical activity.

作者信息

Kempner E S

机构信息

Laboratory of Physical Biology National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD 20892.

出版信息

FEBS Lett. 1993 Jul 12;326(1-3):4-10. doi: 10.1016/0014-5793(93)81749-p.

DOI:10.1016/0014-5793(93)81749-p
PMID:8325386
Abstract

Two classes of protein whose structure is modified by small ligands are reviewed. Proteins of one group contain two massive domains joined by a flexible link; in response to small molecules, the two lobes approach and enclose the ligand. In the other, a short segment of amino acids moves as a flexible loop over the ligand which often is trapped in a non-aqueous environment. Biochemical reaction rates are altered dramatically by these movements.

摘要

本文综述了两类结构因小分子配体而发生改变的蛋白质。一类蛋白质包含两个由柔性连接键相连的巨大结构域;在小分子的作用下,这两个叶状结构靠近并包围配体。另一类蛋白质中,一小段氨基酸以柔性环的形式在配体上方移动,配体通常被困在非水环境中。这些移动会显著改变生化反应速率。

相似文献

1
Movable lobes and flexible loops in proteins. Structural deformations that control biochemical activity.蛋白质中的可移动叶和柔性环。控制生化活性的结构变形。
FEBS Lett. 1993 Jul 12;326(1-3):4-10. doi: 10.1016/0014-5793(93)81749-p.
2
Ligand-induced changes in the binding sites of proteins.配体诱导的蛋白质结合位点变化。
Bioinformatics. 2002 Jul;18(7):939-48. doi: 10.1093/bioinformatics/18.7.939.
3
Molecular recognition by proteins: protein-ligand interactions from a structural perspective.
Biochem Soc Trans. 1996 Feb;24(1):280-4. doi: 10.1042/bst0240280.
4
Structure-function analysis of the Rev-erbA and RVR ligand-binding domains reveals a large hydrophobic surface that mediates corepressor binding and a ligand cavity occupied by side chains.Rev-erbA和RVR配体结合域的结构-功能分析揭示了一个介导共抑制因子结合的大疏水表面以及一个被侧链占据的配体腔。
Mol Endocrinol. 2000 May;14(5):700-17. doi: 10.1210/mend.14.5.0444.
5
Treble clef finger--a functionally diverse zinc-binding structural motif.高音谱号指——一种功能多样的锌结合结构基序。
Nucleic Acids Res. 2001 Apr 15;29(8):1703-14. doi: 10.1093/nar/29.8.1703.
6
How different are structurally flexible and rigid binding sites? Sequence and structural features discriminating proteins that do and do not undergo conformational change upon ligand binding.结构灵活和刚性的结合位点有何不同?区分在配体结合时发生和不发生构象变化的蛋白质的序列和结构特征。
J Mol Biol. 2007 Jan 5;365(1):257-73. doi: 10.1016/j.jmb.2006.09.062. Epub 2006 Sep 29.
7
A role for surface hydrophobicity in protein-protein recognition.表面疏水性在蛋白质-蛋白质识别中的作用。
Protein Sci. 1994 May;3(5):717-29. doi: 10.1002/pro.5560030501.
8
GlnK, a PII-homologue: structure reveals ATP binding site and indicates how the T-loops may be involved in molecular recognition.谷氨酰胺激酶(GlnK),一种PII同源物:结构揭示了ATP结合位点,并表明T环可能如何参与分子识别。
J Mol Biol. 1998 Sep 11;282(1):149-65. doi: 10.1006/jmbi.1998.1979.
9
FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function.FDS:基于连续溶剂模型和软核能量函数的柔性配体与受体对接
J Comput Chem. 2003 Oct;24(13):1637-56. doi: 10.1002/jcc.10295.
10
Predictive models of protein-active sites.
Methods Mol Biol. 2000;143:349-58. doi: 10.1385/1-59259-368-2:349.

引用本文的文献

1
Meridianins and Lignarenone B as Potential GSK3β Inhibitors and Inductors of Structural Neuronal Plasticity.经络元和 Lignarenone B 作为潜在的 GSK3β 抑制剂和结构神经元可塑性诱导剂。
Biomolecules. 2020 Apr 21;10(4):639. doi: 10.3390/biom10040639.
2
Exploring new strategies for grafting binding peptides onto protein loops using a consensus-designed tetratricopeptide repeat scaffold.利用共识设计的四肽重复支架探索将结合肽接枝到蛋白质环上的新策略。
Protein Sci. 2019 Apr;28(4):738-745. doi: 10.1002/pro.3586.
3
Fluorescamine Labeling for Assessment of Protein Conformational Change and Binding Affinity in Protein-Nanoparticle Interaction.
荧光素标记法用于评估蛋白质构象变化和蛋白质-纳米颗粒相互作用中的结合亲和力。
Anal Chem. 2017 Nov 21;89(22):12160-12167. doi: 10.1021/acs.analchem.7b02810. Epub 2017 Nov 8.
4
Graphene oxide as a protein matrix: influence on protein biophysical properties.氧化石墨烯作为蛋白质基质:对蛋白质生物物理性质的影响。
J Nanobiotechnology. 2015 Oct 19;13:70. doi: 10.1186/s12951-015-0134-0.
5
Homotropic cooperativity from the activation pathway of the allosteric ligand-responsive regulatory trp RNA-binding attenuation protein.变构配体响应调节 trp RNA 结合衰减蛋白的激活途径中的同变协同性。
Biochemistry. 2013 Dec 10;52(49):8855-65. doi: 10.1021/bi401364v. Epub 2013 Nov 22.
6
Crystallographic and molecular dynamics analysis of loop motions unmasking the peptidoglycan-binding site in stator protein MotB of flagellar motor.晶体学和分子动力学分析揭示了鞭毛马达定子蛋白 MotB 中环运动使肽聚糖结合位点暴露。
PLoS One. 2011 Apr 20;6(4):e18981. doi: 10.1371/journal.pone.0018981.
7
On the role of protein structural dynamics in the catalytic activity and thermostability of serine protease subtilisin Carlsberg.蛋白质结构动力学在丝氨酸蛋白酶嗜热栖热菌蛋白酶催化活性和热稳定性中的作用
Biotechnol Bioeng. 2009 May 1;103(1):77-84. doi: 10.1002/bit.22221.
8
Hydrogen bond residue positioning in the 599-611 loop of thimet oligopeptidase is required for substrate selection.底物选择需要硫醇寡肽酶599-611环中的氢键残基定位。
FEBS J. 2008 Nov;275(22):5607-17. doi: 10.1111/j.1742-4658.2008.06685.x.
9
Is association of labile enediyne chromophore a mutually assured protection for carrier protein?不稳定的烯二炔发色团的结合对载体蛋白来说是一种相互保证的保护吗?
Anal Biochem. 2008 Oct 1;381(1):18-26. doi: 10.1016/j.ab.2008.06.017. Epub 2008 Jun 14.
10
Evolution of tRNA nucleotidyltransferases: a small deletion generated CC-adding enzymes.转运核糖核酸核苷酸转移酶的进化:一个小缺失产生了添加CC的酶。
Proc Natl Acad Sci U S A. 2008 Jun 10;105(23):7953-8. doi: 10.1073/pnas.0801971105. Epub 2008 Jun 3.