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使用cDNA-纤维素亲和层析法纯化生物活性珠蛋白信使核糖核酸

Purification of biologically active globin mRNA using cDNA-cellulose affinity chromatography.

作者信息

Wood T G, Lingrel J B

出版信息

J Biol Chem. 1977 Jan 25;252(2):457-63.

PMID:833137
Abstract

A complementary DNA (cDNA) copy of mouse globin mRNA was synthesized using the RNA-dependent DNA polymerase from avian myeloblastosis virus and the oligo(dT) covalently attached to cellulose as primer. All four deoxyribonucleotide triphosphates, NaCl, the globin mRNA template, and an oligo(dT) primer were required for optimal synthesis of cDNA. By saturating the primer sites using a 3-fold excess of mRNA, sufficient concentrations of immobilized cDNA could be synthesized to allow the hybridization reactions to be performed using an excess of globin cDNA. Conditions which permitted the annealing of globin mRNA to cDNA-cellulose were selected and the sequence specificity for hybridization to cDNA-cellulose was determined using 28 S ribosomal RNA, polyadenylic acid, and mouse L-cell RNA. Both analytical and preparative applications of this chromatographic medium were explored. When radioactively labeled poly(A)-containing 9 S RNA isolated from nucleated erythroid cells was analyzed by affinity chromatography on globin cDNA-cellulose, 46 per cent of the applied radioactivity hybridized to the cDNA-cellulose column. Only 1 per cent of the labeled RNA was retained by the column during reapplication of the unbound fraction, while 96 per cent of the bound RNA reannealed to cDNA-cellulose. Hybridizations utilizing unfractionated RNA extracts from either mouse reticulocytes or nucleated erythroid cells provided a one-step purification method for globin mRNA sequences. The relative purity of the RNA isolated by cDNA-cellulose affinity chromatography was determined by hybridization kinetic analysis. The cDNA-bound fraction obtained from the unfractionated RNA of either cell type was shown to have a Crt1/2 of 2.7 x 10-3. This represents a 60-fold purification of the globin sequences present in reticulocyte polysomal RNA and a 280-fold enrichment of the globin mRNA in nucleated erythroid cells. Hybridization to cDNA-cellulose did not result in any change in the sedimentation rate of globin mRNA. Furthermore, experiments were performed which demonstrated that the globin mRNA isolated by hybridization to cDNA-cellulose retained its biological activity when assayed in a wheat germ cell-free lysate.

摘要

使用来自禽成髓细胞瘤病毒的依赖RNA的DNA聚合酶和共价连接到纤维素上的寡聚(dT)作为引物,合成了小鼠珠蛋白mRNA的互补DNA(cDNA)拷贝。最佳合成cDNA需要所有四种脱氧核糖核苷三磷酸、氯化钠、珠蛋白mRNA模板和寡聚(dT)引物。通过使用3倍过量的mRNA饱和引物位点,可以合成足够浓度的固定化cDNA,以允许使用过量的珠蛋白cDNA进行杂交反应。选择了允许珠蛋白mRNA与cDNA-纤维素退火的条件,并使用28S核糖体RNA、聚腺苷酸和小鼠L细胞RNA确定了与cDNA-纤维素杂交的序列特异性。探索了这种色谱介质的分析和制备应用。当通过在珠蛋白cDNA-纤维素上进行亲和色谱分析从有核红细胞中分离的放射性标记的含聚(A)的9S RNA时,46%的施加放射性与cDNA-纤维素柱杂交。在未结合部分重新应用期间,只有1%的标记RNA被柱保留,而96%的结合RNA重新与cDNA-纤维素退火。利用从小鼠网织红细胞或有核红细胞中提取的未分级RNA进行杂交,为珠蛋白mRNA序列提供了一种一步纯化方法。通过杂交动力学分析确定了通过cDNA-纤维素亲和色谱分离的RNA的相对纯度。从两种细胞类型的未分级RNA中获得的与cDNA结合的部分显示其Crt1/2为2.7×10-3。这代表了网织红细胞多聚核糖体RNA中存在的珠蛋白序列的60倍纯化以及有核红细胞中珠蛋白mRNA的280倍富集。与cDNA-纤维素杂交不会导致珠蛋白mRNA沉降速率的任何变化。此外,进行的实验表明,通过与cDNA-纤维素杂交分离的珠蛋白mRNA在小麦胚芽无细胞裂解物中进行测定时保留了其生物活性。

相似文献

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Purification of biologically active globin mRNA using cDNA-cellulose affinity chromatography.使用cDNA-纤维素亲和层析法纯化生物活性珠蛋白信使核糖核酸
J Biol Chem. 1977 Jan 25;252(2):457-63.
2
Chromatography of ovalbumin messenger ribonucleic acid on complementary deoxyribonucleic acid-cellulose.卵清蛋白信使核糖核酸在互补脱氧核糖核酸 - 纤维素上的层析
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Purification of a putative precursor of globin messenger RNA from mouse nucleated erythroid cells.从小鼠有核红细胞中纯化珠蛋白信使核糖核酸的一种假定前体。
Proc Natl Acad Sci U S A. 1977 Jan;74(1):178-82. doi: 10.1073/pnas.74.1.178.
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Quantitation of labeled globin messenger RNA by hybridization with excess complementary DNA covalently bound to cellulose.通过与共价结合到纤维素上的过量互补DNA杂交对标记的珠蛋白信使RNA进行定量分析。
Biochemistry. 1976 May 4;15(9):1844-7. doi: 10.1021/bi00654a009.
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Characteristics of rabbit globin mRNA purification by oligo(dT) cellulose chromatography.通过寡聚(dT)纤维素色谱法纯化兔珠蛋白mRNA的特性
Arch Biochem Biophys. 1974 Jul;163(1):146-54. doi: 10.1016/0003-9861(74)90464-0.
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Relative stability of alpha- and beta-globin messenger RNAs in homozygous beta+ thalassemia.纯合β⁺地中海贫血中α-和β-珠蛋白信使核糖核酸的相对稳定性
Proc Natl Acad Sci U S A. 1977 Sep;74(9):3960-4. doi: 10.1073/pnas.74.9.3960.
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Preparative polyacrylamide gel electrophoretic purification of human alpha- and beta-globin messenger RNAs.人α-和β-珠蛋白信使核糖核酸的制备性聚丙烯酰胺凝胶电泳纯化
J Biol Chem. 1977 Apr 10;252(7):2182-6.
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Importance of full size complementary DNA in nucleic acid hybridization.全长互补DNA在核酸杂交中的重要性。
J Biol Chem. 1976 Jun 10;251(11):3425-31.
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Size of the polyadenylic acid region of newly synthesized globin messenger ribonucleic acid.新合成的珠蛋白信使核糖核酸的聚腺苷酸区域大小。
J Biol Chem. 1975 May 25;250(10):3725-8.
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Characterization of globin messenger ribonucleic acids in membrane polysomes of mouse reticulocytes.小鼠网织红细胞膜多聚核糖体中珠蛋白信使核糖核酸的特性分析
J Biol Chem. 1975 Feb 10;250(3):848-52.

引用本文的文献

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Electron microscope study of duck globin mRNA precursor crosslinked in situ.鸭珠蛋白信使核糖核酸前体原位交联的电子显微镜研究
Proc Natl Acad Sci U S A. 1980 Aug;77(8):4683-7. doi: 10.1073/pnas.77.8.4683.
2
The isolation of ecdysterone inducible genes by hybridization subtraction chromatography.通过杂交扣除色谱法分离蜕皮甾酮诱导基因。
Nucleic Acids Res. 1981 Mar 11;9(5):1191-1202. doi: 10.1093/nar/9.5.1191.
3
The location of the globin mRNA sequence within its 16S precursor.珠蛋白信使核糖核酸序列在其16S前体中的位置。
Nucleic Acids Res. 1978 Jan;5(1):105-15. doi: 10.1093/nar/5.1.105.
4
Analysis of the ratio of alpha- to beta-globin and globin messenger ribonucleic acid content of fractionated rabbit erythroid bone-marrow cells.兔红细胞生成性骨髓细胞分级分离后α-珠蛋白与β-珠蛋白比例及珠蛋白信使核糖核酸含量的分析
Biochem J. 1979 Jun 1;179(3):525-35. doi: 10.1042/bj1790525.
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Synthesis and turnover of globin mRNA in murine erythroleukemia cells induced with hemin.用血红素诱导的小鼠红白血病细胞中珠蛋白mRNA的合成与周转
Proc Natl Acad Sci U S A. 1979 Oct;76(10):5173-7. doi: 10.1073/pnas.76.10.5173.
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Enrichment of special Novikoff hepatoma and regenerating liver mRNA by hybridization to cDNA-cellulose.通过与cDNA-纤维素杂交富集特殊的诺维科夫肝癌和再生肝mRNA。
Proc Natl Acad Sci U S A. 1978 Apr;75(4):1736-9. doi: 10.1073/pnas.75.4.1736.