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通过染色体显微切割快速分离和鉴定扩增的DNA:恶性黑色素瘤中IGF1R扩增的鉴定

Rapid isolation and characterization of amplified DNA by chromosome microdissection: identification of IGF1R amplification in malignant melanoma.

作者信息

Zhang J, Trent J M, Meltzer P S

机构信息

Department of Radiation Oncology, University of Michigan, Ann Arbor 48109-0668.

出版信息

Oncogene. 1993 Oct;8(10):2827-31.

PMID:8378091
Abstract

We describe a novel strategy characterizing gene amplification in human neoplasia based on targeting double minutes (dmin) and homogeneously staining regions (hsr) for chromosome microdissection. This strategy allows the rapid generation of an amplification unit microclone library and permits the rapid identification of the chromosomal origin of the amplified sequences following fluorescence in situ hybridization (FISH). This strategy has been applied to an hsr-bearing malignant melanoma cell line, HA-A, which was then demonstrated to encode multiple overexpressed copies of the IGF1R gene. This strategy combines all steps for detection, cloning, mapping and isolation of amplified gene(s) into a single process that is readily applicable to any specimen carrying cytologic evidence of gene amplification.

摘要

我们描述了一种基于靶向双微体(dmin)和均匀染色区(hsr)进行染色体显微切割来鉴定人类肿瘤中基因扩增的新策略。该策略能够快速构建扩增单元微克隆文库,并在荧光原位杂交(FISH)后快速鉴定扩增序列的染色体起源。此策略已应用于携带hsr的恶性黑色素瘤细胞系HA-A,结果表明该细胞系编码多个IGF1R基因的过表达拷贝。该策略将扩增基因的检测、克隆、定位和分离的所有步骤整合到一个单一过程中,该过程可轻松应用于任何携带基因扩增细胞学证据的标本。

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1
Rapid isolation and characterization of amplified DNA by chromosome microdissection: identification of IGF1R amplification in malignant melanoma.通过染色体显微切割快速分离和鉴定扩增的DNA:恶性黑色素瘤中IGF1R扩增的鉴定
Oncogene. 1993 Oct;8(10):2827-31.
2
Hybrid selection of transcribed sequences from microdissected DNA: isolation of genes within amplified region at 20q11-q13.2 in breast cancer.从显微切割的DNA中对转录序列进行杂交选择:乳腺癌中20q11 - q13.2扩增区域内基因的分离
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Microdissected double-minute DNA detects variable patterns of chromosomal localizations and multiple abundantly expressed transcripts in normal and leukemic cells.显微切割的双微体DNA可检测正常细胞和白血病细胞中染色体定位的可变模式以及多种高表达转录本。
Genomics. 1994 Feb;19(3):542-51. doi: 10.1006/geno.1994.1104.
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Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection.通过染色体显微切割鉴定人类乳腺癌中DNA序列扩增的隐匿位点。
Nat Genet. 1994 Oct;8(2):155-61. doi: 10.1038/ng1094-155.
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Amplified KpnL repetitive DNA sequences in homogeneously staining regions of a human melanoma cell line.人黑色素瘤细胞系均匀染色区中扩增的KpnL重复DNA序列。
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Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection.通过染色体显微切割对编码多药耐药相关蛋白(MRP)的扩增子序列进行快速检测、克隆及分子细胞遗传学特征分析。
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Isolation and characterization of genes associated with chromosome-6 mediated tumor suppression in human malignant melanoma.人类恶性黑色素瘤中与6号染色体介导的肿瘤抑制相关基因的分离与鉴定
Oncogene. 1996 Jun 20;12(12):2527-33.
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Gene amplifications characterize acral melanoma and permit the detection of occult tumor cells in the surrounding skin.基因扩增是肢端黑色素瘤的特征,可用于检测周围皮肤中的隐匿肿瘤细胞。
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The p44S10 locus, encoding a subunit of the proteasome regulatory particle, is amplified during progression of cutaneous malignant melanoma.编码蛋白酶体调节颗粒一个亚基的p44S10基因座在皮肤恶性黑色素瘤进展过程中发生扩增。
Oncogene. 2000 Mar 9;19(11):1419-27. doi: 10.1038/sj.onc.1203462.
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Use of microgenomic technology for analysis of alterations in DNA copy number and gene expression in malignant melanoma.利用微基因组技术分析恶性黑色素瘤中DNA拷贝数改变和基因表达情况。
Clin Exp Immunol. 1997 Jan;107 Suppl 1:33-40.

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Autocrine IGF-1/IGF-1R signaling is responsible for constitutive PI3K/Akt activation in acute myeloid leukemia: therapeutic value of neutralizing anti-IGF-1R antibody.自分泌 IGF-1/IGF-1R 信号通路导致急性髓细胞白血病中 PI3K/Akt 的持续激活:中和抗 IGF-1R 抗体的治疗价值。
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Direct isolation of genes encoded within a homogeneously staining region by chromosome microdissection.通过染色体显微切割直接分离均匀染色区中编码的基因。
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Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection.通过染色体显微切割对编码多药耐药相关蛋白(MRP)的扩增子序列进行快速检测、克隆及分子细胞遗传学特征分析。
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