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乔丹,一种与高等植物转座子相似的活跃的团藻转座元件。

Jordan, an active Volvox transposable element similar to higher plant transposons.

作者信息

Miller S M, Schmitt R, Kirk D L

机构信息

Department of Biology, Washington University, St. Louis, Missouri 63130.

出版信息

Plant Cell. 1993 Sep;5(9):1125-38. doi: 10.1105/tpc.5.9.1125.

Abstract

We have isolated a 1595-bp transposable element from the multicellular green alga Volvox carteri following its insertion into the nitrate reductase (nitA) locus. This element, which we have named Jordan, has short (12-bp) terminal inverted repeats and creates a 3-bp target site duplication, like some higher plant transposons of the classic type. Contained within the first 200 bp of one end of the element are 55-bp inverted repeats, one of which begins with the terminal inverted repeat. Revertants of the transposon insertion into the nitA locus were obtained at a rate of approximately 10(-4) per Volvox embryo per generation. In each revertant examined, all transposon sequences were completely excised, but footprints containing both sets of duplicated bases, in addition to three to nine extra bases, were left behind. Jordan contains no significant open reading frames and so appears to be nonautonomous. DNA gel blot analysis indicates that Jordan is a member of a large family of homologous elements in the Volvox genome. We have isolated and characterized several of these homologs and found that they contain terminal very similar to those of Jordan. Efforts to utilize Jordan and its homologs as tools to tag and clone developmentally interesting genes of Volvox are discussed.

摘要

我们从多细胞绿藻卡特氏团藻中分离出一个1595碱基对的转座元件,它插入到硝酸还原酶(nitA)基因座中。这个元件,我们命名为乔丹,具有短的(12碱基对)末端反向重复序列,并产生一个3碱基对的靶位点重复,类似于一些经典类型的高等植物转座子。在元件一端的前200碱基对中包含55碱基对的反向重复序列,其中一个以末端反向重复序列开始。转座子插入到nitA基因座中的回复突变体以每代每个团藻胚胎约10^(-4)的频率获得。在每个检测的回复突变体中,所有转座子序列都被完全切除,但留下了包含两组重复碱基以及三到九个额外碱基的足迹。乔丹不包含明显的开放阅读框,因此似乎是非自主的。DNA凝胶印迹分析表明乔丹是团藻基因组中一个大型同源元件家族的成员。我们已经分离并鉴定了其中几个同源物,发现它们的末端与乔丹的末端非常相似。本文讨论了利用乔丹及其同源物作为工具来标记和克隆团藻中发育相关有趣基因的研究工作。

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