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腺嘌呤衍生物与酪氨酸侧链的氢键作用。

Hydrogen bonding of adenine derivatives to tyrosine side chain.

作者信息

Lancelot G

出版信息

Biophys J. 1977 Mar;17(3):243-54. doi: 10.1016/S0006-3495(77)85653-1.

DOI:10.1016/S0006-3495(77)85653-1
PMID:843583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1473243/
Abstract

High resolution proton magnetic resonance measurements provide evidence for the formation of hydrogen-bonded complexes between 9-ethyladenine and p-cresol used as a model of tyrosine side chain in CDCl3. We have calculated the sum of the association constants corresponding to the three existing 1:1 complexes: K=6.3+/-0.15. By methylation of the amino group of adenine, we were able to calculate the ratio of the two strongest equilibrium constants K7/K1=1.6+/-0.3. Theoretical computations by the complete neglect of differential overlap (CNDO/2) method indicate that several hydrogen-bonded planar complexes can form between 9-methyladenine and phenol. The computed energy of the complexes with 6-dimethylamino adenine removes some ambiguity concerning the computed ratio of the association constants. Comparison of the calculated energies with free energies experimentally determined in organic solvent shows that despite the competition with CDCl3, which associates with both solute molecules, the preferential order of association is conserved. The small variations of charge density of adenine carbon atoms when complexed with phenol are in agreement with very small chemical shifts observed by 13C-nuclear magnetic resonance.

摘要

高分辨率质子磁共振测量结果为9-乙基腺嘌呤与用作酪氨酸侧链模型的对甲酚在CDCl₃中形成氢键复合物提供了证据。我们计算了对应于三种现有1:1复合物的缔合常数之和:K = 6.3±0.15。通过腺嘌呤氨基的甲基化,我们能够计算出两个最强平衡常数的比值K₇/K₁ = 1.6±0.3。采用完全忽略微分重叠(CNDO/2)方法进行的理论计算表明,9-甲基腺嘌呤和苯酚之间可以形成几种氢键平面复合物。用6-二甲基氨基腺嘌呤计算出的复合物能量消除了关于缔合常数计算比值的一些模糊性。将计算出的能量与在有机溶剂中实验测定的自由能进行比较表明,尽管存在与溶质分子都缔合的CDCl₃的竞争,但缔合的优先顺序得以保留。腺嘌呤碳原子与苯酚络合时电荷密度的微小变化与¹³C核磁共振观察到的非常小的化学位移一致。

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引用本文的文献

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本文引用的文献

1
Hydrogen bonding of amino acid side chains to nucleic acid bases.氨基酸侧链与核酸碱基之间的氢键作用。
FEBS Lett. 1973 Mar 1;30(2):219-224. doi: 10.1016/0014-5793(73)80655-6.
2
Model nucleoprotein complexes: studies on the interaction of cationic homopolypeptides with DNA.模型核蛋白复合物:阳离子同聚多肽与DNA相互作用的研究
J Mol Biol. 1967 Mar 14;24(2):157-76. doi: 10.1016/0022-2836(67)90324-5.
3
X-ray diffraction studies of enzymes.酶的X射线衍射研究。
Annu Rev Biochem. 1970;39:63-100. doi: 10.1146/annurev.bi.39.070170.000431.
4
Carbon-13 magnetic resonance. XVII. Pyrimidine and purine nucleosides.碳-13磁共振。十七。嘧啶和嘌呤核苷。
J Am Chem Soc. 1970 Jul 1;92(13):4079-87. doi: 10.1021/ja00716a042.
5
Deoxyribonucleic acid-polylysine complexes. Structure and nucleotide specificity.脱氧核糖核酸-聚赖氨酸复合物。结构与核苷酸特异性。
Biochemistry. 1969 Aug;8(8):3219-32. doi: 10.1021/bi00836a014.
6
Interactions of aromatic residues of proteins with nucleic acid. II. Proton magnetic resonance studies of the binding of tyramine and tyrosine-containing peptides to poly(adenylic acid) and deoxyribonucleic acid.蛋白质芳香族残基与核酸的相互作用。II. 酪胺及含酪氨酸肽与聚腺苷酸和脱氧核糖核酸结合的质子磁共振研究
Biochemistry. 1974 Feb 12;13(4):724-30. doi: 10.1021/bi00701a014.
7
Effects of methylation on the stability of nucleic acid conformations: studies at the monomer level.甲基化对核酸构象稳定性的影响:单体水平的研究
Biochemistry. 1974 Sep 24;13(20):4143-58. doi: 10.1021/bi00717a013.
8
Specific recognition of single-stranded regions in ultraviolet-irradiated and heat-denatured DNA by tryptophan-containing peptides.含色氨酸的肽对紫外线照射和热变性DNA中单链区域的特异性识别。
Proc Natl Acad Sci U S A. 1974 Aug;71(8):3185-8. doi: 10.1073/pnas.71.8.3185.
9
The interaction specificity of peptides with DNA. Evidence for peptide beta-sheet-DNA binding.肽与DNA的相互作用特异性。肽β-折叠与DNA结合的证据。
Biochemistry. 1976 Jan 13;15(1):152-7. doi: 10.1021/bi00646a023.
10
Stereospecific binding of diastereomeric peptides to salmon sperm DNA.
Biochemistry. 1976 Jan 13;15(1):146-51. doi: 10.1021/bi00646a022.