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核内前体信使核糖核酸的结构组织。II. 核内前体信使核糖核酸中的非常长的双链结构

The structural organization of nuclear pre-mRNA. II. Very long double-stranded structures in nuclear pre-mRNA.

作者信息

Kramerov D A, Ryskov A P, Georgiev G P

出版信息

Biochim Biophys Acta. 1977 Apr 4;475(3):461-75. doi: 10.1016/0005-2787(77)90062-4.

DOI:10.1016/0005-2787(77)90062-4
PMID:851536
Abstract

High molecular weight nuclear pre-messenger RNA (pre-mRNA or hnRNA) isolated from Ehrlich ascites carcinoma cells contains besides moderately long (100--200 base pairs) snap-back double-stranded structures, also longer double-stranded structure containing at least 300--800 base pairs. Their double-stranded nature was proved by Cs2SO4 gradient centrifugation. Very long double-stranded sequences are not able to snap-back after RNA melting. While the moderately long double-stranded RNA (dsRNA) is renatured at C0t1/2 approximately equal to 5-10(-4), the very long dsRNA shows a higher complexity (C0t1/2 approximately equal to 2-10(-2). They also hybridize to less reiterated class of DNA than moderately long dsRNA. Two classes of dsRNA are represented by different sequences as followed from cross-renaturation experiments. Very long dsRNA forms stable hybrids with 20% of total poly(A)+mRNA of cytoplasm. The properties of different classes of ds structures present in nuclear pre-mRNA are compared and their possible nature is discussed. The presence of very long dsRNA may reflect either the symmetric transcription of structural genes, or the transcription from those DNA sequences which are complementary to each other but located in different parts of the genome.

摘要

从艾氏腹水癌细胞中分离出的高分子量核内前体信使核糖核酸(前体mRNA或核内不均一RNA),除了含有中等长度(100 - 200个碱基对)的回折双链结构外,还含有至少300 - 800个碱基对的更长双链结构。通过硫酸铯梯度离心证明了它们的双链性质。RNA解链后,非常长的双链序列无法回折。中等长度的双链RNA(dsRNA)在C0t1/2约等于5 - 10(-4)时复性,而非常长的dsRNA显示出更高的复杂度(C0t1/2约等于2 - 10(-2))。与中等长度的dsRNA相比,它们与重复程度较低的DNA类别的杂交能力也较弱。从交叉复性实验可以看出,两类dsRNA由不同序列代表。非常长的dsRNA与细胞质中20%的总poly(A)+mRNA形成稳定杂交体。对核内前体mRNA中存在的不同类别ds结构的性质进行了比较,并讨论了它们可能的性质。非常长的dsRNA的存在可能反映了结构基因的对称转录,或者是从基因组中彼此互补但位于不同部位的DNA序列转录而来。

相似文献

1
The structural organization of nuclear pre-mRNA. II. Very long double-stranded structures in nuclear pre-mRNA.核内前体信使核糖核酸的结构组织。II. 核内前体信使核糖核酸中的非常长的双链结构
Biochim Biophys Acta. 1977 Apr 4;475(3):461-75. doi: 10.1016/0005-2787(77)90062-4.
2
[Structure of nuclear pre-mRNA. X. New type double-helical structures in the pre-mRNA].[核内前体信使核糖核酸的结构。X. 前体信使核糖核酸中的新型双螺旋结构]
Mol Biol (Mosk). 1978 Mar-Apr;12(2):343-55.
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Long double-stranded sequences (dsRNA-B) of nuclear pre-mRNA consist of a few highly abundant classes of sequences: evidence from DNA cloning experiments.核内前体信使核糖核酸的长双链序列(dsRNA-B)由几类高度丰富的序列组成:来自DNA克隆实验的证据。
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The structural organization of nuclear messenger RNA precursor. I. Reassociation and hybridization properties of double-stranded hairpin-like loops in messenger RNA precursor.核信使核糖核酸前体的结构组织。I. 信使核糖核酸前体中双链发夹样环的重新缔合和杂交特性。
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[Cloning in Escherichia coli cells of mouse DNA fragments homologous to two main species of long hairpin regions of pre-mRNA].[在大肠杆菌细胞中克隆与前体信使核糖核酸(pre-mRNA)的两种主要长发夹区域物种同源的小鼠DNA片段]
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The properties of oligonucleotide fragments containing the triphosphorylated 5'-termini of nuclear pre-mRNA from Ehrlich ascites carcinoma cells.来自艾氏腹水癌细胞的核内前体信使核糖核酸中含有三磷酸化5′末端的寡核苷酸片段的性质。
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Structure of nuclear pre-mRNA. VI. "Reversed repeats" in animal DNA and their hybridization with double-stranded regions of pre-mRNA.核内前体信使核糖核酸的结构。VI. 动物DNA中的“反向重复序列”及其与前体信使核糖核酸双链区域的杂交
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Kinetic estimation of the base sequence complexity of poly(A)-containing mRNA in Ehrlich-ascites-tumor cells and its abundance in nuclear RNA.艾氏腹水瘤细胞中含聚腺苷酸信使核糖核酸碱基序列复杂性的动力学估计及其在核核糖核酸中的丰度
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[The structure of nuclear pre-mRNA. VII. The hybridization and renaturation properties of double-stranded sequences of nuclear pre-mRNA].[核内前体信使核糖核酸的结构。VII. 核内前体信使核糖核酸双链序列的杂交与复性特性]
Mol Biol (Mosk). 1975 Jan-Feb;9(1):6-18.
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[Double-helical structure and complementary sequence in nuclear mRNA precursors].[核mRNA前体中的双螺旋结构和互补序列]
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引用本文的文献

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The nucleotide sequence of the ubiquitous repetitive DNA sequence B1 complementary to the most abundant class of mouse fold-back RNA.与最丰富的一类小鼠回折RNA互补的普遍存在的重复DNA序列B1的核苷酸序列。
Nucleic Acids Res. 1980 Mar 25;8(6):1201-15. doi: 10.1093/nar/8.6.1201.
2
Structural analysis of interspersed repetitive polymerase III transcription units in human DNA.人类DNA中散布的重复聚合酶III转录单元的结构分析。
Nucleic Acids Res. 1981 Mar 11;9(5):1151-70.
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Mobile dispersed genetic elements and their possible relation to carcinogenesis.
移动分散遗传元件及其与致癌作用的可能关系。
Mol Biol Rep. 1980 Dec 31;6(4):249-54. doi: 10.1007/BF00777533.
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Double-stranded sequences in RNA of Drosophila melanogaster: relation to mobile dispersed genes.黑腹果蝇RNA中的双链序列:与移动分散基因的关系。
Nucleic Acids Res. 1980 Aug 11;8(15):3439-57. doi: 10.1093/nar/8.15.3439.
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Ubiquitous transposon-like repeats B1 and B2 of the mouse genome: B2 sequencing.小鼠基因组中普遍存在的类转座子重复序列B1和B2:B2测序
Nucleic Acids Res. 1982 Dec 11;10(23):7461-75. doi: 10.1093/nar/10.23.7461.
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Mouse ubiquitous B2 repeat in polysomal and cytoplasmic poly(A)+RNAs: uniderectional orientation and 3'-end localization.小鼠多核糖体和细胞质多聚腺苷酸(poly(A))+RNA中的普遍存在的B2重复序列:单向取向和3'端定位。
Nucleic Acids Res. 1983 Sep 24;11(18):6541-58. doi: 10.1093/nar/11.18.6541.
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The sequences homologous to major interspersed repeats B1 and B2 of mouse genome are present in mRNA and small cytoplasmic poly(A) + RNA.与小鼠基因组主要散布重复序列B1和B2同源的序列存在于信使核糖核酸和小的细胞质多聚腺苷酸阳性核糖核酸中。
Nucleic Acids Res. 1982 Dec 11;10(23):7477-91. doi: 10.1093/nar/10.23.7477.
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Sequences hybridizing to mRNA, oligo(dT) and dsRNA from pre-mRNA are contiguous in the cloned mouse DNA fragments.与mRNA、寡聚(dT)以及来自前体mRNA的双链RNA杂交的序列,在克隆的小鼠DNA片段中是连续的。
Nucleic Acids Res. 1980 Feb 11;8(3):425-40. doi: 10.1093/nar/8.3.425.
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Transposon-like sequences in extrachromosomal circular DNA from mouse thymocytes.来自小鼠胸腺细胞的染色体外环状DNA中的类转座子序列。
Proc Natl Acad Sci U S A. 1985 Apr;82(7):2072-6. doi: 10.1073/pnas.82.7.2072.
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