Monzingo A F, Marcotte E M, Hart P J, Robertus J D
Department of Chemistry and Biochemistry, University of Texas, Austin 78712, USA.
Nat Struct Biol. 1996 Feb;3(2):133-40. doi: 10.1038/nsb0296-133.
Barley chitinase, bacterial chitosanase, and lysozymes from goose (GEWL), phage (T4L) and hen (HEWL) all hydrolyse related polysaccharides. The proteins share no significant amino-acid similarities, but have a structurally invariant core consisting of two helices and a three-stranded beta-sheet which form the substrate-binding and catalytic cleft. These enzymes represent a superfamily of hydrolases which are likely to have arisen by divergent evolution. Based on structural criteria, we divide the hydrolase superfamily into a bacterial family (chitosanase and T4L) and a eucaryotic family represented by chitinase and GEWL. Both families contain the core but have differing N- and C-terminal domains. Inclusion of chitinase and chitosanase in the superfamily suggests the archetypal catalytic mechanism of the group is an inverting mechanism. The retaining mechanism of HEWL is unusual.
大麦几丁质酶、细菌壳聚糖酶以及来自鹅(GEWL)、噬菌体(T4L)和母鸡(HEWL)的溶菌酶都能水解相关多糖。这些蛋白质在氨基酸序列上没有显著的相似性,但具有一个结构不变的核心,该核心由两条螺旋和一个三链β折叠组成,形成底物结合和催化裂隙。这些酶代表了一个水解酶超家族,它们可能是通过趋异进化产生的。基于结构标准,我们将水解酶超家族分为一个细菌家族(壳聚糖酶和T4L)和一个以几丁质酶和GEWL为代表的真核生物家族。两个家族都包含核心结构,但具有不同的N端和C端结构域。将几丁质酶和壳聚糖酶纳入超家族表明该组的原型催化机制是一种转化机制。HEWL的保留机制则不同寻常。