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来自艾伯塔省的颤杨(Populus tremuloides Michx.)自然种群内部及种群间的随机扩增多态性DNA(RAPD)变异

RAPD variation within and among natural populations of trembling aspen (Populus tremuloides Michx.) from Alberta.

作者信息

Yeh F C, Chong D K, Yang R C

机构信息

Department of Renewable Resources, University of Alberta, Edmonton, Canada.

出版信息

J Hered. 1995 Nov-Dec;86(6):454-60. doi: 10.1093/oxfordjournals.jhered.a111620.

DOI:10.1093/oxfordjournals.jhered.a111620
PMID:8568211
Abstract

This article described the population structure of trembling aspen (Populus tremuloides Michx.) in Alberta, a dioecious tree with continuous and wide distribution, and with a primary mode of reproduction through suckering. We studied random amplified polymorphic DNA (RAPD) variation in 249 trees from eight natural populations. Trees within a population were a minimum of 200 m apart to decrease the risk of sampling ramets of a single ortet. Of a total of 28 amplified RAPD products (bands) from five random oligonucleotide primers, the frequencies at seven (25%) were heterogeneous across populations and the percentage of polymorphism averaged 90.2 per population. Estimates of Shannon's phenotypic diversity index ranged between 0.58 and 0.69 among populations, averaging 0.65. There were 246 multiband phenotypes among the 249 trees; three were each shared by two trees from different populations and the remaining 243 were unique. Thus, trees within populations probably were different clones. Analysis of molecular variance partitioned the RAPD variation into the among- and within-population components. The within-population component accounted for 97.4% of the variation and was significantly different from zero at the 2% level of probability. The among-population component, although accounting for only 2.6% of the variation, was significantly different from zero at the 1% level of probability. Pairwise tests for the homogeneity of the RAPD variance between populations suggested significant divergences among 18 of the 28 (64%) population pairs.

摘要

本文描述了艾伯塔省颤杨(Populus tremuloides Michx.)的种群结构,颤杨是一种雌雄异株的树木,分布连续且广泛,主要通过吸根进行繁殖。我们研究了来自八个自然种群的249棵树的随机扩增多态性DNA(RAPD)变异。种群内的树木彼此相距至少200米,以降低采集单个原株分株的风险。从五个随机寡核苷酸引物扩增得到的总共28个RAPD产物(条带)中,有七个(25%)的频率在不同种群间存在异质性,每个种群的多态性百分比平均为90.2%。种群间的香农表型多样性指数估计值在0.58至0.69之间,平均为0.65。在这249棵树中有246种多带型表型;其中三种由来自不同种群的两棵树共享,其余243种是独特的。因此,种群内的树木可能是不同的克隆体。分子方差分析将RAPD变异分为种群间和种群内成分。种群内成分占变异的97.4%,在2%的概率水平上显著不同于零。种群间成分虽然仅占变异的2.6%,但在1%的概率水平上显著不同于零。对种群间RAPD方差同质性的成对检验表明,28对种群中有18对(64%)存在显著差异。

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