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配子发生过程与多位点基因同源性。

Gametogenesis processes and multilocus gene identity by descent.

作者信息

Guo S W

机构信息

Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor 48109-2029, USA, swguo/sph.umich.edu

出版信息

Am J Hum Genet. 1996 Feb;58(2):408-19.

Abstract

With few exceptions, the determination of unconditional probability of genes shared identical by descent (IBD) by relatives can be very difficult, especially if the relationship is complex or if multiple loci are involved. It is particularly difficult if one needs the IBD probability in a explicit form, expressed in terms of interlocus recombination fractions. In this paper, I will further extend the concept of gametogenesis process introduced elsewhere and indicate that it completely determines the gene IBD events of interest in pedigrees. I will demonstrate that the gametogenesis process not only serves as a convenient conceptual framework in considering IBD events in pedigrees but also provides a simple yet powerful tool to solve a wide range of seemingly difficult problems. In particular, I consider the problem of multilocus IBD probability for relative pairs, k siblings, and a group of pedigree members. In addition, I consider the problem of multilocus autozygosity probability and the problem of gene preservation in close relatives.

摘要

除少数例外情况外,确定亲属间通过血缘共享相同基因(IBD)的无条件概率非常困难,尤其是当亲属关系复杂或涉及多个基因座时。如果需要以明确的形式,用基因座间重组率来表示IBD概率,那就特别困难。在本文中,我将进一步扩展在其他地方引入的配子发生过程的概念,并指出它完全决定了家系中感兴趣的基因IBD事件。我将证明,配子发生过程不仅是考虑家系中IBD事件的一个方便的概念框架,而且还提供了一个简单而强大的工具来解决一系列看似困难的问题。特别是,我考虑了相对对、k个兄弟姐妹以及一组家系成员的多位点IBD概率问题。此外,我还考虑了多位点纯合性概率问题以及近亲中的基因保存问题。

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本文引用的文献

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The correlations between relatives in random mating populations.随机交配群体中亲属之间的相关性。
Cold Spring Harb Symp Quant Biol. 1955;20:60-75; discussion, 75-8. doi: 10.1101/sqb.1955.020.01.008.
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Genetics. 1993 Mar;133(3):681-91. doi: 10.1093/genetics/133.3.681.
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Genetic dissection of complex traits.复杂性状的基因剖析
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A recursive algorithm for the calculation of identity coefficients.一种用于计算同一性系数的递归算法。
Ann Hum Genet. 1981 Jul;45(3):299-305. doi: 10.1111/j.1469-1809.1981.tb00341.x.

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