Ring A
Department of Physiology and Medical Biophysics, Biomedical Centre, Uppsala, Sweden.
Biochim Biophys Acta. 1996 Jan 31;1278(2):147-59. doi: 10.1016/0005-2736(95)00220-0.
The influence of boundary conditions on the deformation energy of a lipid membrane containing a gramicidin A channel was evaluated numerically. A liquid crystal model was used to calculate the relative contributions of compression, splay and surface tension. It is proposed that the nearest neighbor lipid molecules are displaced from the channel end in a direction perpendicular to the bilayer and it is concluded that surface tension is the major component of the deformation free energy for monoolein (gmo)/n-alkane membranes. This unexpected result supports the validity of the liquid crystal models of membrane deformation since gramicidin lifetime has been shown to correlate with surface tension for gmo membranes. The theory accurately predicts the experimentally measured relative lifetimes without the use of adjustable parameters. For conditions where splay may be neglected surface tension is always the major component of the deformation energy, irrespective of the magnitude of the compression coefficient. The deformation may extend for hundreds of angstroms from the peptide. The results obtained here are expected to be important for the characterization of protein-membrane interactions in general.
数值评估了边界条件对含有短杆菌肽A通道的脂质膜变形能的影响。使用液晶模型来计算压缩、展曲和表面张力的相对贡献。研究表明,最近邻的脂质分子在垂直于双层的方向上从通道末端位移,并且得出结论,表面张力是单油精(gmo)/正构烷烃膜变形自由能的主要成分。这一意外结果支持了膜变形液晶模型的有效性,因为已表明短杆菌肽的寿命与gmo膜的表面张力相关。该理论无需使用可调参数就能准确预测实验测量的相对寿命。在展曲可忽略的条件下,无论压缩系数的大小如何,表面张力始终是变形能的主要成分。变形可能从肽延伸数百埃。预计这里获得的结果对于一般蛋白质 - 膜相互作用的表征具有重要意义。