Pechik I, Ji X, Fidelis K, Karavitis M, Moult J, Brinigar W S, Fronticelli C, Gilliland G L
Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville 20850, USA.
Biochemistry. 1996 Feb 13;35(6):1935-45. doi: 10.1021/bi9519967.
The crystal structure of the mutant deoxyhemoglobin in which the beta-globin Val67(E11) has been replaced with threonine [Fronticelli et al. (1993) Biochemistry 32, 1235-1242] has been determined at 2.2 A resolution. Prior to the crystal structure determination, molecular modeling indicated that the Thr67(E11) side chain hydroxyl group in the distal beta-heme pocket forms a hydrogen bond with the backbone carbonyl of His63(E7) and is within hydrogen-bonding distance of the N delta of His63(E7). The mutant crystal structure indicates only small changes in conformation in the vicinity of the E11 mutation confirming the molecular modeling predictions. Comparison of the structures of the mutant beta-subunits and recombinant porcine myoglobin with the identical mutation [Cameron et al. (1993) Biochemistry 32, 13061-13070] indicates similar conformations of residues in the distal heme pocket, but there is no water molecule associated with either of the threonines of the beta-subunits. The introduction of threonine into the distal heme pocket, despite having only small perturbations in the local structure, has a marked affect on the interaction with ligands. In the oxy derivative there is a 2-fold decrease in O2 affinity [Fronticelli et al. (1993) Biochemistry 32, 1235-1242], and the rate of autoxidation is increased by 2 orders of magnitude. In the CO derivative the IR spectrum shows modifications with respect to that of normal human hemoglobin, suggesting the presence of multiple CO conformers. In the nitrosyl derivative an interaction with the O gamma atom of Thr67(E11) is probably responsible for the 10-fold increase in the rate of NO release from the beta-subunits. In the aquomet derivative there is a 6-fold decrease in the rate of hemin dissociation suggesting an interaction of the Fe-coordinated water with the O gamma of Thr67(E11).
已测定β-珠蛋白Val67(E11)被苏氨酸取代的突变型脱氧血红蛋白的晶体结构[弗龙蒂塞利等人(1993年),《生物化学》32卷,1235 - 1242页],分辨率为2.2埃。在确定晶体结构之前,分子模拟表明,远端β-血红素口袋中的Thr67(E11)侧链羟基与His63(E7)的主链羰基形成氢键,且处于His63(E7)的Nδ的氢键距离内。突变晶体结构表明,E11突变附近的构象仅有微小变化,证实了分子模拟预测。将突变型β-亚基和重组猪肌红蛋白(具有相同突变)[卡梅伦等人(1993年),《生物化学》32卷,13061 - 13070页]的结构进行比较,结果表明远端血红素口袋中残基的构象相似,但β-亚基的两个苏氨酸均未与水分子结合。尽管在局部结构中仅有微小扰动,但在远端血红素口袋中引入苏氨酸对与配体的相互作用有显著影响。在氧合衍生物中,O2亲和力降低了2倍[弗龙蒂塞利等人(1993年),《生物化学》32卷,1235 - 1242页],自氧化速率增加了2个数量级。在CO衍生物中,红外光谱显示相对于正常人血红蛋白有修饰,表明存在多种CO构象体。在亚硝酰基衍生物中,与Thr67(E11)的Oγ原子相互作用可能是β-亚基中NO释放速率增加10倍的原因。在高铁水合衍生物中,血红素解离速率降低了6倍,表明Fe配位的水与Thr67(E11)的Oγ相互作用。