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拟南芥腈水解酶1编码基因的结构

Structure of the gene encoding nitrilase 1 from Arabidopsis thaliana.

作者信息

Hillebrand H, Tiemann B, Hell R, Bartling D, Weiler E W

机构信息

Lehrstuhl für Pflanzenphysiologie, Ruhr-Universität, Bochum, Germany.

出版信息

Gene. 1996 May 8;170(2):197-200. doi: 10.1016/0378-1119(95)00839-x.

DOI:10.1016/0378-1119(95)00839-x
PMID:8666244
Abstract

The nitrilases of Arabidopsis thaliana (At) catalyze the conversion of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA), thus controlling the last step of auxin biosynthesis. A full-length genomic clone encoding the complete cluster of the At nitrilases 1 to 3 (NIT1-3), including the respective promoter regions, has been isolated and the NIT1 isoform has been sequenced. The coding region (nit1) spans about 2.3 kb and is composed of five exons separated by four introns. The exon-intron splice junctions agree with the consensus sequences typical for plant genes. In agreement with the known cDNA sequence, the exons encode a protein of 346 amino acids (aa) with a deduced molecular mass of 38.2 kDa. The transcription start point (tsp) of nit1 was determined by primer extension experiments. This tsp defines a 5' untranslated region of 36 bp and is located 32 bp downstream from a TATA box. The promoter region of nit1 is located within the approx. 1.5-kb intergenic part that separates the nit2 and nit1 coding sections.

摘要

拟南芥(At)的腈水解酶催化吲哚 - 3 - 乙腈(IAN)转化为吲哚 - 3 - 乙酸(IAA),从而控制生长素生物合成的最后一步。已分离出一个编码At腈水解酶1至3(NIT1 - 3)完整簇的全长基因组克隆,包括各自的启动子区域,并对NIT1同工型进行了测序。编码区(nit1)跨度约2.3 kb,由五个外显子和四个内含子分隔。外显子 - 内含子剪接接头与植物基因典型的共有序列一致。与已知的cDNA序列一致,外显子编码一个346个氨基酸(aa)的蛋白质,推导分子量为38.2 kDa。通过引物延伸实验确定了nit1的转录起始点(tsp)。该tsp定义了一个36 bp的5'非翻译区,位于TATA框下游32 bp处。nit1的启动子区域位于分隔nit2和nit1编码区的约1.5 kb基因间隔区内。

相似文献

1
Structure of the gene encoding nitrilase 1 from Arabidopsis thaliana.拟南芥腈水解酶1编码基因的结构
Gene. 1996 May 8;170(2):197-200. doi: 10.1016/0378-1119(95)00839-x.
2
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Plant Mol Biol. 1998 Jan;36(1):89-99. doi: 10.1023/a:1005998918418.
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Molecular characterization of two cloned nitrilases from Arabidopsis thaliana: key enzymes in biosynthesis of the plant hormone indole-3-acetic acid.来自拟南芥的两种克隆腈水解酶的分子特征:植物激素吲哚-3-乙酸生物合成中的关键酶。
Proc Natl Acad Sci U S A. 1994 Jun 21;91(13):6021-5. doi: 10.1073/pnas.91.13.6021.

引用本文的文献

1
Structural analysis of the nit2/nit1/nit3 gene cluster encoding nitrilases, enzymes catalyzing the terminal activation step in indole-acetic acid biosynthesis in Arabidopsis thaliana.编码腈水解酶的nit2/nit1/nit3基因簇的结构分析,腈水解酶是催化拟南芥吲哚-3-乙酸生物合成中末端激活步骤的酶。
Plant Mol Biol. 1998 Jan;36(1):89-99. doi: 10.1023/a:1005998918418.
2
Arabidopsis mutants resistant to the auxin effects of indole-3-acetonitrile are defective in the nitrilase encoded by the NIT1 gene.对吲哚 - 3 - 乙腈的生长素效应具有抗性的拟南芥突变体在由NIT1基因编码的腈水解酶中存在缺陷。
Plant Cell. 1997 Oct;9(10):1781-90. doi: 10.1105/tpc.9.10.1781.