• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过碳-13核磁共振法测定枯草杆菌蛋白酶-(氯甲烷抑制剂)衍生物中活性位点组氨酸的电离状态。

Determination of the ionization state of the active-site histidine in a subtilisin-(chloromethane inhibitor) derivative by 13C-NMR.

作者信息

O'Connell T P, Malthouse J P

机构信息

Department of Biochemistry, University College Dublin, Belfield, Ireland.

出版信息

Biochem J. 1996 Jul 1;317 ( Pt 1)(Pt 1):35-40. doi: 10.1042/bj3170035.

DOI:10.1042/bj3170035
PMID:8694783
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1217482/
Abstract

Subtilisin BPN' has been alkylated using benzyloxycarbonyl-glycylglycyl[1-13C]phenylalanylchloromethane+ ++. Using difference 13C-NMR spectroscopy a single signal due to the 13C-enriched alpha-methylene carbon of the subtilisin-(chloromethane inhibitor) derivative was detected. No evidence for the denaturation/ autolysis of this derivative was obtained from pH 3.5 to 11.5. However, incubating at pH 12.75 or heating in the presence of SDS at pH 6.9 did denature this derivative. The negative titration shift of the alpha-methylene carbon of the denatured derivatives confirmed that the inhibitor had alkylated N-3 of the imidazole ring of the active-site histidine. The positive titration shift of 3.96 p.p.m. and the pKa of 7.04 obtained from studying the native subtilisin-(chloromethane inhibitor) derivative are assigned to oxyanion formation. We conclude that the pKa of the alkylated histidine residue in the native subtilisin-(chloromethane inhibitor) derivative must be > 12 and that subtilisin preferentially stabilizes the zwitterionic tetrahedral adduct consisting of the oxyanion and the imidazolium ion of the active-site histidine residue. We show that even before the oxyanion is formed the pKa of the active-site histidine must be much greater than that of the oxyanion in the zwitterionic tetrahedral adduct. We discuss the significance of our results for the catalytic mechanism of the serine proteinases.

摘要

枯草杆菌蛋白酶BPN'已使用苄氧羰基 - 甘氨酰甘氨酰[1 - 13C]苯丙氨酰氯甲烷进行烷基化处理。通过13C - NMR差谱法检测到了枯草杆菌蛋白酶 - (氯甲烷抑制剂)衍生物中由于富含13C的α - 亚甲基碳产生的单一信号。从pH 3.5至11.5未获得该衍生物变性/自溶的证据。然而,在pH 12.75下孵育或在pH 6.9的SDS存在下加热确实使该衍生物变性。变性衍生物的α - 亚甲基碳的负滴定位移证实抑制剂已使活性位点组氨酸咪唑环的N - 3烷基化。通过研究天然枯草杆菌蛋白酶 - (氯甲烷抑制剂)衍生物获得的3.96 ppm的正滴定位移和7.04的pKa值归因于氧阴离子的形成。我们得出结论,天然枯草杆菌蛋白酶 - (氯甲烷抑制剂)衍生物中烷基化组氨酸残基的pKa必须> 12,并且枯草杆菌蛋白酶优先稳定由活性位点组氨酸残基的氧阴离子和咪唑鎓离子组成的两性离子四面体加合物。我们表明,即使在氧阴离子形成之前,活性位点组氨酸的pKa也必须远大于两性离子四面体加合物中氧阴离子的pKa。我们讨论了我们的结果对丝氨酸蛋白酶催化机制的意义。

相似文献

1
Determination of the ionization state of the active-site histidine in a subtilisin-(chloromethane inhibitor) derivative by 13C-NMR.通过碳-13核磁共振法测定枯草杆菌蛋白酶-(氯甲烷抑制剂)衍生物中活性位点组氨酸的电离状态。
Biochem J. 1996 Jul 1;317 ( Pt 1)(Pt 1):35-40. doi: 10.1042/bj3170035.
2
A study of the stabilization of tetrahedral adducts by trypsin and delta-chymotrypsin.一项关于胰蛋白酶和δ-胰凝乳蛋白酶对四面体加合物稳定性影响的研究。
Biochem J. 1992 Sep 15;286 ( Pt 3)(Pt 3):889-900. doi: 10.1042/bj2860889.
3
A 13C-NMR study of the role of Asn-155 in stabilizing the oxyanion of a subtilisin tetrahedral adduct.一项关于天冬酰胺-155在稳定枯草杆菌蛋白酶四面体加合物氧负离子中作用的13C核磁共振研究。
Biochem J. 1997 Sep 15;326 ( Pt 3)(Pt 3):861-6. doi: 10.1042/bj3260861.
4
A 13C-n.m.r. investigation of ionizations within a trypsin-inhibitor complex. Evidence that the pKa of histidine-57 is raised by interaction with the hemiketal oxyanion.对胰蛋白酶抑制剂复合物内电离作用的¹³C核磁共振研究。组氨酸-57的pKa因与半缩酮氧阴离子相互作用而升高的证据。
Biochem J. 1985 Nov 1;231(3):677-82. doi: 10.1042/bj2310677.
5
13C NMR study of how the oxyanion pKa values of subtilisin and chymotrypsin tetrahedral adducts are affected by different amino acid residues binding in enzyme subsites S1-S4.关于枯草杆菌蛋白酶和胰凝乳蛋白酶四面体加合物的氧阴离子pKa值如何受到在酶S1 - S4亚位点结合的不同氨基酸残基影响的13C核磁共振研究。
Biochemistry. 1999 May 11;38(19):6187-94. doi: 10.1021/bi990126c.
6
A study of the stabilization of the oxyanion of tetrahedral adducts by trypsin, chymotrypsin and subtilisin.一项关于胰蛋白酶、胰凝乳蛋白酶和枯草杆菌蛋白酶对四面体加合物氧阴离子稳定性的研究。
Biochem J. 1995 Apr 15;307 ( Pt 2)(Pt 2):353-9. doi: 10.1042/bj3070353.
7
A 1H-NMR study of the histidine resonance's of native subtilisin and of subtilisin inhibited by benzyloxycarbonylglycylglycylphenylalanyl-chloromethane.天然枯草杆菌蛋白酶及被苄氧羰基甘氨酰甘氨酰苯丙氨酰氯甲烷抑制的枯草杆菌蛋白酶的组氨酸共振的1H-核磁共振研究
Biochem Soc Trans. 1996 Feb;24(1):135S. doi: 10.1042/bst024135s.
8
A 13C-n.m.r. investigation of the ionizations within an inhibitor--alpha-chymotrypsin complex. Evidence that both alpha-chymotrypsin and trypsin stabilize a hemiketal oxyanion by similar mechanisms.抑制剂-α-糜蛋白酶复合物内电离作用的13C核磁共振研究。α-糜蛋白酶和胰蛋白酶通过相似机制稳定半缩酮氧阴离子的证据。
Biochem J. 1989 Mar 15;258(3):853-9. doi: 10.1042/bj2580853.
9
13C- and 1H-NMR studies of oxyanion and tetrahedral intermediate stabilization by the serine proteinases: optimizing inhibitor warhead specificity and potency by studying the inhibition of the serine proteinases by peptide-derived chloromethane and glyoxal inhibitors.丝氨酸蛋白酶对氧负离子和四面体中间体稳定作用的13C-和1H-核磁共振研究:通过研究肽衍生的氯甲烷和乙二醛抑制剂对丝氨酸蛋白酶的抑制作用来优化抑制剂弹头的特异性和效力。
Biochem Soc Trans. 2007 Jun;35(Pt 3):566-70. doi: 10.1042/BST0350566.
10
13C-NMR study of the inhibition of delta-chymotrypsin by a tripeptide-glyoxal inhibitor.三肽-乙二醛抑制剂对δ-胰凝乳蛋白酶抑制作用的13C核磁共振研究
Biochem J. 2002 Mar 1;362(Pt 2):339-47. doi: 10.1042/0264-6021:3620339.

引用本文的文献

1
Kinetic Studies of the Effect of pH on the Trypsin-Catalyzed Hydrolysis of -α-benzyloxycarbonyl-l-lysine--nitroanilide: Mechanism of Trypsin Catalysis.pH对胰蛋白酶催化水解α-苄氧羰基-L-赖氨酸-对硝基苯胺影响的动力学研究:胰蛋白酶催化机制
ACS Omega. 2020 Mar 3;5(10):4915-4923. doi: 10.1021/acsomega.9b03750. eCollection 2020 Mar 17.
2
A new lysine derived glyoxal inhibitor of trypsin, its properties and utilization for studying the stabilization of tetrahedral adducts by trypsin.一种新型的源自赖氨酸的胰蛋白酶乙二醛抑制剂、其性质以及用于研究胰蛋白酶对四面体加合物的稳定作用
Biochem Biophys Rep. 2016 Jan 4;5:272-284. doi: 10.1016/j.bbrep.2015.12.015. eCollection 2016 Mar.
3
13C-NMR study of the inhibition of delta-chymotrypsin by a tripeptide-glyoxal inhibitor.三肽-乙二醛抑制剂对δ-胰凝乳蛋白酶抑制作用的13C核磁共振研究
Biochem J. 2002 Mar 1;362(Pt 2):339-47. doi: 10.1042/0264-6021:3620339.

本文引用的文献

1
THE IDENTIFICATION OF THE HISTIDINE RESIDUE AT THE ACTIVE CENTER OF CHYMOTRYPSIN.胰凝乳蛋白酶活性中心组氨酸残基的鉴定
J Biol Chem. 1965 Feb;240:694-8.
2
Direct evidence for the presence of histidine in the active center of chymotrypsin.关于组氨酸存在于胰凝乳蛋白酶活性中心的直接证据。
Biochemistry. 1963 Mar-Apr;2:252-5. doi: 10.1021/bi00902a008.
3
Low-barrier hydrogen bonds and enzymic catalysis.低势垒氢键与酶催化
Science. 1994 Jun 24;264(5167):1887-90. doi: 10.1126/science.8009219.
4
Low-barrier hydrogen bonding in molecular complexes analogous to histidine and aspartate in the catalytic triad of serine proteases.在分子复合物中类似于丝氨酸蛋白酶催化三联体中组氨酸和天冬氨酸的低势垒氢键。
Biochemistry. 1995 May 30;34(21):6919-24. doi: 10.1021/bi00021a002.
5
A study of the stabilization of the oxyanion of tetrahedral adducts by trypsin, chymotrypsin and subtilisin.一项关于胰蛋白酶、胰凝乳蛋白酶和枯草杆菌蛋白酶对四面体加合物氧阴离子稳定性的研究。
Biochem J. 1995 Apr 15;307 ( Pt 2)(Pt 2):353-9. doi: 10.1042/bj3070353.
6
On low-barrier hydrogen bonds and enzyme catalysis.论低势垒氢键与酶催化作用
Science. 1995 Jul 7;269(5220):102-6. doi: 10.1126/science.7661987.
7
A low-barrier hydrogen bond in the catalytic triad of serine proteases.丝氨酸蛋白酶催化三联体中的低势垒氢键。
Science. 1994 Jun 24;264(5167):1927-30. doi: 10.1126/science.7661899.
8
The reactivity of thiol-subtilisin, an enzyme containing a synthetic functional group.硫醇枯草杆菌蛋白酶(一种含有合成官能团的酶)的反应活性。
Biochemistry. 1967 Feb;6(2):610-20. doi: 10.1021/bi00854a032.
9
Identification of the histidine residue at the active center of trypsin labelled by TLCK.鉴定经甲苯磺酰-L-赖氨酸氯甲基酮(TLCK)标记的胰蛋白酶活性中心的组氨酸残基。
Biochem Biophys Res Commun. 1967 May 5;27(3):391-7. doi: 10.1016/s0006-291x(67)80112-8.
10
Subtilisin BPN': inactivation by chloromethyl ketone derivates of peptide substrates.枯草杆菌蛋白酶BPN':肽底物的氯甲基酮衍生物使其失活
Arch Biochem Biophys. 1970 Jun;138(2):526-31. doi: 10.1016/0003-9861(70)90377-2.