Nagase T, Seki N, Ishikawa K, Tanaka A, Nomura N
Kazusa DNA Research Institute, Chiba, Japan.
DNA Res. 1996 Feb 29;3(1):17-24. doi: 10.1093/dnares/3.1.17.
As part of our continuing efforts to accumulate information on the coding region of unidentified human genes, we newly determined the sequences of 40 cDNA clones of human cell line KG-1 which correspond to relatively long and nearly full-length transcripts, and predicted the coding sequences of the corresponding genes, named KIAA0161 to 0200. The average size of the cDNA clones analyzed was approximately 5.0 kb. A computer search of the sequences in public databases indicated that the sequences of 20 genes were unrelated to any reported genes, while the remaining 20 genes carried sequences which show some similarities to known genes. Among the genes in the latter category, KIAA0167 contained a Zn-finger motif with significant structural similarity to that of the yeast transcription factor GCS1, and KIAA0189 was classified into the RhoGAP gene family. Stretches of typical CAG (Gln) repeats, which were often correlated with genetic disorders, were found in KIAA0181 and KIAA0192. Another novel repeat composed of alternating Arg and Glu was identified in KIAA0182. Northern hybridization analysis demonstrated that 10 genes are expressed in a cell- or tissue-specific manner.
作为我们持续积累未鉴定人类基因编码区信息工作的一部分,我们新测定了人类细胞系KG-1的40个cDNA克隆的序列,这些克隆对应相对较长且近乎全长的转录本,并预测了相应基因(命名为KIAA0161至0200)的编码序列。所分析的cDNA克隆的平均大小约为5.0 kb。对公共数据库中的序列进行计算机检索表明,20个基因的序列与任何已报道的基因均无关联,而其余20个基因携带的序列与已知基因存在一些相似性。在后一类基因中,KIAA0167含有一个锌指基序,其结构与酵母转录因子GCS1的锌指基序具有显著相似性,并且KIAA0189被归类为RhoGAP基因家族。在KIAA0181和KIAA0192中发现了典型的CAG(谷氨酰胺)重复序列片段,这些片段常与遗传疾病相关。在KIAA0182中鉴定出了另一种由精氨酸和谷氨酸交替组成的新型重复序列。Northern杂交分析表明,10个基因以细胞或组织特异性方式表达。