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葡萄球菌质粒pGO1上接合转移起始点(oriT)及编码单链核酸内切酶的基因(nes)的起源鉴定与特性分析

Identification and characterization of the origin of conjugative transfer (oriT) and a gene (nes) encoding a single-stranded endonuclease on the staphylococcal plasmid pGO1.

作者信息

Climo M W, Sharma V K, Archer G L

机构信息

Department of Medicine, Medical College of Virginia, Virginia Commonwealth University, Richmond 23298-0049, USA.

出版信息

J Bacteriol. 1996 Aug;178(16):4975-83. doi: 10.1128/jb.178.16.4975-4983.1996.

Abstract

The genes mediating the conjugative transfer of the 52-kb staphylococcal plasmid pGO1 are within a 14.4-kb gene cluster designated trs. However, a clone containing trs alone cannot transfer independently and no candidate oriT has been found within or contiguous to trs. In this study, we identified a 1,987-bp open reading frame (ORF) 24 kb 3' and 13 kb 5' to trs that was essential for conjugative transfer: transposon insertions into the ORF abolished transfer and a plasmid containing the ORF could complement these transposon-inactivated pGO1 mutants for transfer. Analysis of the nucleotide sequence of this ORF revealed significant homology between the amino terminus of its predicted protein and those of several single-stranded endonucleases. In addition, a 12-bp DNA sequence located 100 bp 5' to the ORF's translational start site was identical to the oriT sequences of the conjugative or mobilizable plasmids RSF1010, pTF1, R1162, pSC101, and pIP501. The ability of the ORF, designated nes (for nicking enzyme of staphylococci), to generate a single-stranded nick at the oriT was demonstrated in Escherichia coli by alkaline gel and DNA sequence analysis of open circular plasmid DNA. Plasmids that could be converted to the open circular form by the presence of oriT and nes could also be mobilized at high frequency into Staphylococcus aureus recipients with a second plasmid containing only trs. We propose that the 14.4 kb of trs and the approximately 2.2 kb of the oriT-nes region, coupled with an origin of replication, make up the minimal staphylococcal conjugative replicon.

摘要

介导52kb葡萄球菌质粒pGO1接合转移的基因位于一个名为trs的14.4kb基因簇内。然而,仅包含trs的克隆不能独立转移,并且在trs内部或与之相邻的区域未发现候选oriT。在本研究中,我们在trs的3'端24kb和5'端13kb处鉴定出一个1987bp的开放阅读框(ORF),它对于接合转移至关重要:转座子插入该ORF会消除转移,并且含有该ORF的质粒可以互补这些转座子失活的pGO1突变体进行转移。对该ORF核苷酸序列的分析表明,其预测蛋白质的氨基末端与几种单链内切核酸酶的氨基末端具有显著同源性。此外,位于该ORF翻译起始位点5'端100bp处的一个12bp DNA序列与接合型或可移动质粒RSF1010、pTF1、R1162、pSC101和pIP501的oriT序列相同。通过碱性凝胶和开放环状质粒DNA的DNA序列分析,在大肠杆菌中证明了名为nes(葡萄球菌切口酶)的ORF在oriT处产生单链切口的能力。通过oriT和nes的存在可转化为开放环状形式的质粒,也可以高频转移到仅含有trs的第二个质粒的金黄色葡萄球菌受体中。我们提出,14.4kb的trs和大约2.2kb的oriT-nes区域,再加上一个复制起点,构成了最小的葡萄球菌接合复制子。

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