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氟化物和甲酸盐与血红蛋白和肌红蛋白结合的结构决定因素:晶体学和1H-NMR弛豫测量研究。

Structural determinants of fluoride and formate binding to hemoglobin and myoglobin: crystallographic and 1H-NMR relaxometric study.

作者信息

Aime S, Fasano M, Paoletti S, Cutruzzolà F, Desideri A, Bolognesi M, Rizzi M, Ascenzi P

机构信息

Department of Inorganic, Physical and Materials Chemistry, University of Turin, Italy.

出版信息

Biophys J. 1996 Jan;70(1):482-8. doi: 10.1016/S0006-3495(96)79593-0.

Abstract

The x-ray crystal structure of the fluoride derivative of ferric sperm whale (Physeter catodon) myoglobin (Mb) has been determined at 2.5 A resolution (R = 0.187) by difference Fourier techniques. The fluoride anion, sitting in the central part of the heme distal site and coordinated to the heme iron, is hydrogen bonded to the distal His(64)E7 NE2 atom and to the W195 solvent water molecule. This water molecule also significantly interacts with the same HisE7 residue, which stabilizes the coordinated fluoride ion. Moreover, fluoride and formate binding to ferric Aplysia limacina Mb, sperm whale (Physeter catodon) Mb, horse (Caballus caballus) Mb, loggerhead sea turtle (Caretta caretta) Mb, and human hemoglobin has been investigated by 1H-NMR relaxometry. A strong solvent proton relaxation enhancement is observed for the fluoride derivatives of hemoproteins containing HisE7. Conversely, only a small outer-sphere contribution to the solvent relaxation rate has been observed for all of the formate derivatives considered and for the A. limacina Mb:fluoride derivative, where HisE7 is replaced by Val.

摘要

通过差值傅里叶技术,已在2.5埃分辨率(R = 0.187)下测定了抹香鲸(Physeter catodon)肌红蛋白(Mb)氟化物衍生物的X射线晶体结构。氟阴离子位于血红素远端位点的中心部分并与血红素铁配位,它通过氢键与远端His(64)E7的NE2原子以及W195溶剂水分子相连。该水分子也与相同的HisE7残基有显著相互作用,从而稳定了配位的氟离子。此外,已通过1H-NMR弛豫测量法研究了氟化物和甲酸盐与海兔(Aplysia limacina)肌红蛋白、抹香鲸(Physeter catodon)肌红蛋白、马(Caballus caballus)肌红蛋白、蠵龟(Caretta caretta)肌红蛋白以及人血红蛋白的结合情况。对于含有HisE7的血红蛋白的氟化物衍生物,观察到强烈的溶剂质子弛豫增强。相反,对于所有考虑的甲酸盐衍生物以及HisE7被缬氨酸取代的海兔肌红蛋白:氟化物衍生物,仅观察到对溶剂弛豫速率的小的外层球贡献。

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