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血红素与珠蛋白结合的缔合速率常数与蛋白质结构无关。

The association rate constant for heme binding to globin is independent of protein structure.

作者信息

Hargrove M S, Barrick D, Olson J S

机构信息

Department of Biochemistry and Cell Biology, Rice University, Houston, Texas 77251-1892, USA.

出版信息

Biochemistry. 1996 Sep 3;35(35):11293-9. doi: 10.1021/bi960371l.

Abstract

Rate constants for CO-heme binding to 35 different recombinant apomyoglobins and several other apoproteins were measured in an effort to understand the factors governing heme affinity and the velocity of the association reaction. Surprisingly, the rate constant for the binding of monomeric heme is approximately 1 x 10(8) M-1 s-1 regardless of the structure or overall affinity of the apoprotein for iron-porphyrin. Major differences between the proteins are reflected primarily in the rates of dissociation of the prosthetic group. Slow phases observed in the reaction of CO heme with excess apomyoglobin result from formation of nonspecific heme-protein complexes which must dissociate before heme can bind specifically in the heme pocket. Once the specific heme-globin complex is formed, the heme pocket rapidly collapses around the porphyrin, simultaneously forming the bond between the proximal His93 and the heme iron atom. The overall affinity of sperm whale apomyoglobin for hemin is approximately 1 x 10(14) M-1. Nonspecific hydrophobic interactions between the porphyrin and the apolar heme cavity account for a factor of 10(5)-10(7). Covalent bond formation between Fe3+ and His93(F8) provides an additional factor of 10(3)-10(4). Specific interactions with conserved amino acids in the heme pocket contribute the final factor of 10(3)-10(4).

摘要

为了了解影响血红素亲和力和结合反应速度的因素,我们测量了一氧化碳血红素与35种不同重组脱辅基肌红蛋白及其他几种脱辅基蛋白结合的速率常数。令人惊讶的是,单体血红素结合的速率常数约为1×10⁸ M⁻¹ s⁻¹,与脱辅基蛋白对铁卟啉的结构或总体亲和力无关。蛋白质之间的主要差异主要体现在辅基的解离速率上。一氧化碳血红素与过量脱辅基肌红蛋白反应中观察到的慢相是由于形成了非特异性血红素-蛋白质复合物,在血红素能够特异性结合到血红素口袋之前,这些复合物必须解离。一旦形成特异性血红素-球蛋白复合物,血红素口袋会迅速围绕卟啉折叠,同时在近端His93和血红素铁原子之间形成键。抹香鲸脱辅基肌红蛋白对血红素的总体亲和力约为1×10¹⁴ M⁻¹。卟啉与非极性血红素腔之间的非特异性疏水相互作用占10⁵ - 10⁷的系数。Fe³⁺与His93(F8)之间的共价键形成提供了另外10³ - 10⁴的系数。与血红素口袋中保守氨基酸的特异性相互作用贡献了最后的10³ - 10⁴的系数。

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