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酿酒酵母四号染色体右臂32,500碱基对区域的核苷酸序列分析。

Nucleotide sequence analysis of a 32,500 bp region of the right arm of Saccharomyces cerevisiae chromosome IV.

作者信息

Brandt P, Ramlow S, Otto B, Bloecker H

机构信息

Gesellschaft für Biotechnologische Forschung mbH, Braunschweig, Germany.

出版信息

Yeast. 1996 Jan;12(1):85-90. doi: 10.1002/(SICI)1097-0061(199601)12:1%3C85::AID-YEA890%3E3.0.CO;2-U.

Abstract

We have sequenced a region containing 32.5 kb of the right arm of chromosome IV of Saccharomyces cerevisiae. Twenty open reading frames (ORFs) greater than 100 amino acids could be identified in this region. Six ORFs correspond to known yeast genes, including DOA4, UBC5 and UBC3, the gene products of which are involved in ubiquitin metabolism. UBC5 is preceded by the two tRNA genes tRNA-Arg2 and tRNA-Asp. Six genes were discovered with homologies to non-yeast genes or with homologies to other yeast ORFs. One of these could be identified as ribosomal protein gene RPS13. The putative function of eight ORFs remains unclear because comparison to different DNA or protein databases revealed no significant patterns. The sequence from cosmid 2F21 was obtained entirely by a combined subcloning and walking primer strategy, and has been deposited in the EMBL data library under Accession Number X84162.

摘要

我们对酿酒酵母四号染色体右臂上一段包含32.5 kb的区域进行了测序。在该区域可鉴定出20个大于100个氨基酸的开放阅读框(ORF)。其中六个ORF对应已知的酵母基因,包括DOA4、UBC5和UBC3,其基因产物参与泛素代谢。UBC5之前有两个tRNA基因tRNA-Arg2和tRNA-Asp。发现六个基因与非酵母基因同源或与其他酵母ORF同源。其中一个可鉴定为核糖体蛋白基因RPS13。八个ORF的推定功能仍不清楚,因为与不同的DNA或蛋白质数据库比较未发现显著模式。粘粒2F21的序列完全通过亚克隆和步移引物策略获得,并已存入EMBL数据库,登录号为X84162。

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