Acerenza L
Sección Biofisica, Facultad de Ciencias, Universidad de la República, Montevideo, Urugway.
Biosystems. 1996;39(2):109-16. doi: 10.1016/0303-2647(96)01606-1.
The sensitivity properties of a reaction scheme that can show highly sensitive responses is studied (see e.g. Okamoto, M., Sakai, T. and Hayashi, K., 1987, Biosystems 21, 1-11). This model was previously proposed to represent a 'chemical diode', a 'chemical McCulloch Pitts neuron', the cycling of a cofactor or the interconversion of a covalently modifiable enzyme. The sensitivity of the steady-state flux and concentrations with respect to changes in a rate is quantified by the control coefficient (CC). Two types of constraints reduce the sensitivity patterns that the model can exhibit: the structural and kinetic constraints. The existence of these constraints substantially reduces the number of CC that can show arbitrary values. For instance, under extreme kinetic constraints, the value of one CC suffices to determine the values of the other thirty nine. The dependent CC are obtained as a function of the independent CC in two particular cases: the chemical case, governed by simple mass action rate laws, and the biochemical case, catalyzed by saturable enzymes. It is shown that the biochemical case exhibits a qualitatively richer repertoire of sensitivity patterns than the chemical case. Although the strategy developed in this work is restricted to a particular model its application is general. The usefulness of this type of analysis in the solution of problems ranging from design of chemical/biochemical devices to evolution of metabolism is discussed.
研究了一种能够呈现高度敏感响应的反应体系的敏感性特性(例如,见冈本,M.,酒井,T.和林,K.,1987年,《生物系统》21卷,1 - 11页)。该模型先前被提出用于表示“化学二极管”、“化学麦卡洛克 - 皮茨神经元”、辅因子的循环或共价可修饰酶的相互转化。稳态通量和浓度相对于速率变化的敏感性通过控制系数(CC)来量化。两种类型的约束会减少该模型能够展现的敏感性模式:结构约束和动力学约束。这些约束的存在极大地减少了能够呈现任意值的控制系数的数量。例如,在极端动力学约束下,一个控制系数的值就足以确定其他三十九个控制系数的值。在两种特定情况下,依赖的控制系数作为独立控制系数的函数获得:化学情况,由简单的质量作用速率定律支配;生化情况,由可饱和酶催化。结果表明,生化情况比化学情况展现出在性质上更丰富的敏感性模式。尽管这项工作中开发的策略仅限于一个特定模型,但其应用是通用的。讨论了这类分析在解决从化学/生化装置设计到代谢进化等一系列问题中的有用性。