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一个关于突变体以及定点诱变实验对G蛋白偶联受体影响的数据库。

A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors.

作者信息

Kristiansen K, Dahl S G, Edvardsen O

机构信息

Department of Pharmacology, University of Tromsø, Norway.

出版信息

Proteins. 1996 Sep;26(1):81-94. doi: 10.1002/(SICI)1097-0134(199609)26:1<81::AID-PROT8>3.0.CO;2-J.

Abstract

A database system and computer programs for storage and retrieval of information about guanine nucleotide-binding protein (G protein) -coupled receptor mutants and associated biological effects have been developed. Mutation data on the receptors were collected from the literature and a database of mutants and effects of mutations was developed. The G protein-coupled receptor, family A, point mutation database (GRAP) provides detailed information on ligand-binding and signal transduction properties of more than 2130 receptor mutants. The amino acid sequences of receptors for which mutation experiments have been reported were aligned, and from this alignment mutation data may be retrieved. Alternatively, a search form allowing detailed specification of which mutants to retrieve may be used, for example, to search for specific amino acid substitutions, substitutions in specific protein domains or reported biological effects. Furthermore, ligand and bibliographic oriented queries may be performed. GRAP is available on the Internet (URL: http://www-grap.fagmed.uit.no/GRAP/+ +homepage.html) using the World-Wide Web system.

摘要

已经开发出一种数据库系统和计算机程序,用于存储和检索有关鸟嘌呤核苷酸结合蛋白(G蛋白)偶联受体突变体及相关生物学效应的信息。从文献中收集了受体的突变数据,并建立了一个突变体及突变效应的数据库。A类G蛋白偶联受体点突变数据库(GRAP)提供了有关2130多个受体突变体的配体结合和信号转导特性的详细信息。已报道进行过突变实验的受体的氨基酸序列进行了比对,据此可以检索突变数据。或者,可以使用一个搜索表单,详细指定要检索哪些突变体,例如,搜索特定的氨基酸取代、特定蛋白质结构域中的取代或已报道的生物学效应。此外,还可以进行基于配体和文献的查询。GRAP可通过万维网系统在互联网上获取(网址:http://www - grap.fagmed.uit.no/GRAP/+ +homepage.html)。

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