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核酶P RNA的结构-功能分析

Structure-function analysis in nuclear RNase P RNA.

作者信息

Engelke D R, Pagán-Ramos E, Tranguch A J

机构信息

Department of Biological Chemistry, University of Michigan, Ann Arbor 48109-0606, USA.

出版信息

Mol Biol Rep. 1995;22(2-3):157-60. doi: 10.1007/BF00988722.

DOI:10.1007/BF00988722
PMID:8901504
Abstract

Eukaryotic ribonuclease P (RNase P) enzymes require both RNA and protein subunits for activity in vivo and in vitro. We have undertaken an analysis of the complex RNA subunit of the nuclear holoenzyme in an effort to understand its structure and its similarities to and differences from the bacterial ribozymes. Phylogenetic analysis, structure-sensitive RNA footprinting, and directed mutagenesis reveal conserved secondary and tertiary structures with both strong similarities to the bacterial consensus and distinctive features. The effects of mutations in the most highly conserved positions are being used to dissect the functions of individual subdomains.

摘要

真核核糖核酸酶P(RNase P)在体内和体外发挥活性都需要RNA和蛋白质亚基。我们对核全酶的复杂RNA亚基进行了分析,以了解其结构以及与细菌核酶的异同。系统发育分析、结构敏感的RNA足迹分析和定向诱变揭示了保守的二级和三级结构,这些结构与细菌共有序列有很强的相似性,也有独特的特征。在最保守位置的突变效应正被用于剖析各个亚结构域的功能。

相似文献

1
Structure-function analysis in nuclear RNase P RNA.核酶P RNA的结构-功能分析
Mol Biol Rep. 1995;22(2-3):157-60. doi: 10.1007/BF00988722.
2
Analysis of conserved positions in nuclear RNase P RNA.核酶P RNA中保守位置的分析
Nucleic Acids Symp Ser. 1995(33):89-91.
3
Structure-sensitive RNA footprinting of yeast nuclear ribonuclease P.酵母核糖核酸酶P的结构敏感型RNA足迹分析
Biochemistry. 1994 Feb 22;33(7):1778-87. doi: 10.1021/bi00173a022.
4
Saccharomyces cerevisiae nuclear ribonuclease P: structure and function.酿酒酵母核糖核酸酶P:结构与功能
Methods Enzymol. 2001;342:101-17. doi: 10.1016/s0076-6879(01)42539-0.
5
Functional equivalence of hairpins in the RNA subunits of RNase MRP and RNase P in Saccharomyces cerevisiae.酿酒酵母中核糖核酸酶MRP和核糖核酸酶P的RNA亚基中发夹结构的功能等效性。
RNA. 2000 May;6(5):653-8. doi: 10.1017/s1355838200992574.
6
Evidence for an RNA-based catalytic mechanism in eukaryotic nuclear ribonuclease P.真核细胞核核糖核酸酶P中基于RNA的催化机制的证据。
RNA. 2000 Apr;6(4):554-62. doi: 10.1017/s1355838200991477.
7
Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme.细菌核糖核酸酶P全酶三维结构的分子建模
J Mol Biol. 2003 Jan 24;325(4):661-75. doi: 10.1016/s0022-2836(02)01267-6.
8
Comparative structural analysis of nuclear RNase P RNAs from yeast.酵母核核糖核酸酶P RNA的比较结构分析
J Biol Chem. 1993 Jul 5;268(19):14045-55.
9
An essential protein-binding domain of nuclear RNase P RNA.核核糖核酸酶P RNA的一个必需蛋白质结合结构域。
RNA. 2001 Apr;7(4):565-75. doi: 10.1017/s1355838201001996.
10
Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: randomization of universally conserved positions in the RNA subunit.酿酒酵母核酶P的突变分析:RNA亚基中普遍保守位置的随机化
RNA. 1996 May;2(5):441-51.

本文引用的文献

1
Comparative structural analysis of nuclear RNase P RNAs from yeast.酵母核核糖核酸酶P RNA的比较结构分析
J Biol Chem. 1993 Jul 5;268(19):14045-55.
2
Identification of a 100-kDa protein associated with nuclear ribonuclease P activity in Schizosaccharomyces pombe.粟酒裂殖酵母中与核糖核酸酶P活性相关的100 kDa蛋白的鉴定。
Eur J Biochem. 1993 Oct 15;217(2):501-7. doi: 10.1111/j.1432-1033.1993.tb18270.x.
3
Replacement of the Saccharomyces cerevisiae RPR1 gene with heterologous RNase P RNA genes.用异源核糖核酸酶P RNA基因替换酿酒酵母RPR1基因。
Nucleic Acids Res. 1994 Jan 25;22(2):200-7. doi: 10.1093/nar/22.2.200.
4
Structure-sensitive RNA footprinting of yeast nuclear ribonuclease P.酵母核糖核酸酶P的结构敏感型RNA足迹分析
Biochemistry. 1994 Feb 22;33(7):1778-87. doi: 10.1021/bi00173a022.
5
The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins.POP1基因编码核糖核酸酶MRP和核糖核酸酶P核糖核蛋白共有的一种蛋白质成分。
Genes Dev. 1994 Jun 15;8(12):1423-33. doi: 10.1101/gad.8.12.1423.
6
Partial purification and characterization of RNase P from Dictyostelium discoideum.盘基网柄菌核糖核酸酶P的部分纯化及特性分析
Eur J Biochem. 1995 Mar 15;228(3):976-80. doi: 10.1111/j.1432-1033.1995.tb20349.x.
7
Identification of phosphates involved in catalysis by the ribozyme RNase P RNA.鉴定核酶RNase P RNA催化过程中涉及的磷酸盐。
RNA. 1995 Apr;1(2):210-8.
8
Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA.利用光亲和交联和分子建模分析核糖核酸酶P RNA的整体结构。
EMBO J. 1994 Sep 1;13(17):3953-63. doi: 10.1002/j.1460-2075.1994.tb06711.x.
9
Human RNaseP RNA and nucleolar 7-2 RNA share conserved 'To' antigen-binding domains.人核糖核酸酶P RNA与核仁7-2 RNA共享保守的“To”抗原结合结构域。
Mol Cell Biochem. 1994 Jan 12;130(1):75-82. doi: 10.1007/BF01084270.
10
Nucleotide sequences of the RNA subunit of RNase P from several mammals.几种哺乳动物核糖核酸酶P的RNA亚基的核苷酸序列。
Genomics. 1993 Nov;18(2):418-22. doi: 10.1006/geno.1993.1488.