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RNA周转与线粒体基因表达的调控

RNA turnover and the control of mitochondrial gene expression.

作者信息

Margossian S P, Butow R A

机构信息

Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas 75235, USA.

出版信息

Trends Biochem Sci. 1996 Oct;21(10):392-6.

PMID:8918194
Abstract

Recent evidence suggests that RNA turnover in yeast mitochondria is important, not only to regulate RNA abundance, but also to facilitate group I intron splicing and suppress the potentially toxic effect of high levels of excised group I intron RNAs. Protein-assisted splicing of group I introns requires that splicing factors are 'actively' recycled, because of their tight binding to the intron RNA. The putative NTP-dependent RNA helicase Suv3p might promote this recycling and, at the same time, suppress intron overaccumulation because of the functional association of this protein with mtEXO, a novel 3'-5' exoribonuclease that can degrade excised group I intron RNAs.

摘要

最近的证据表明,酵母线粒体中的RNA周转很重要,不仅对于调节RNA丰度很重要,而且对于促进I组内含子剪接以及抑制高水平切除的I组内含子RNA的潜在毒性作用也很重要。由于I组内含子的剪接因子与内含子RNA紧密结合,因此蛋白质辅助的I组内含子剪接要求剪接因子“主动”循环利用。推测的依赖NTP的RNA解旋酶Suv3p可能促进这种循环利用,同时抑制内含子的过度积累,因为该蛋白质与mtEXO存在功能关联,mtEXO是一种新型的3'-5'外切核糖核酸酶,能够降解切除的I组内含子RNA。

相似文献

1
RNA turnover and the control of mitochondrial gene expression.RNA周转与线粒体基因表达的调控
Trends Biochem Sci. 1996 Oct;21(10):392-6.
2
The DExH box protein Suv3p is a component of a yeast mitochondrial 3'-to-5' exoribonuclease that suppresses group I intron toxicity.DExH盒蛋白Suv3p是酵母线粒体3'至5'外切核糖核酸酶的一个组成部分,该酶可抑制I组内含子毒性。
Cell. 1996 Jan 26;84(2):199-209. doi: 10.1016/s0092-8674(00)80975-7.
3
Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intron in vitro.DEAD盒蛋白pMSS116的过表达促进酵母II组内含子在体外的ATP依赖性剪接。
Nucleic Acids Res. 1995 Aug 11;23(15):2966-72.
4
Mitochondrial splicing requires a protein from a novel helicase family.线粒体剪接需要一种来自新型解旋酶家族的蛋白质。
Nature. 1989 Jan 5;337(6202):84-7. doi: 10.1038/337084a0.
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Splicing of yeast aI5beta group I intron requires SUV3 to recycle MRS1 via mitochondrial degradosome-promoted decay of excised intron ribonucleoprotein (RNP).酵母 aI5beta 组 I 内含子的剪接需要 SUV3 通过线粒体降解体促进切除内含子核糖核蛋白(RNP)的降解来回收 MRS1。
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Overexpressed yeast mitochondrial putative RNA helicase Mss116 partially restores proper mtRNA metabolism in strains lacking the Suv3 mtRNA helicase.过表达的酵母线粒体假定RNA解旋酶Mss116可部分恢复缺乏Suv3线粒体RNA解旋酶的菌株中正常的线粒体RNA代谢。
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Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intron in vitro.DEAD盒蛋白pMSS116的过表达在体外促进酵母II组内含子的ATP依赖性剪接。
Nucleic Acids Res. 1995 Sep 11;23(17):2966-72.
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The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria.在裂殖酵母线粒体中,成熟转录本的3'末端由一个加工体复合物产生。
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Yeast nuclear PET127 gene can suppress deletions of the SUV3 or DSS1 genes: an indication of a functional interaction between 3' and 5' ends of mitochondrial mRNAs.酵母核PET127基因可抑制SUV3或DSS1基因的缺失:这表明线粒体mRNA的3'端和5'端之间存在功能相互作用。
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The S. cerevisiae nuclear gene SUV3 encoding a putative RNA helicase is necessary for the stability of mitochondrial transcripts containing multiple introns.酿酒酵母中编码一种假定RNA解旋酶的核基因SUV3,对于含有多个内含子的线粒体转录本的稳定性是必需的。
Curr Genet. 1995 Aug;28(3):217-24. doi: 10.1007/BF00309780.

引用本文的文献

1
Structural analysis of mtEXO mitochondrial RNA degradosome reveals tight coupling of nuclease and helicase components.线粒体RNA降解体(mtEXO)的结构分析揭示了核酸酶和解旋酶组分的紧密偶联。
Nat Commun. 2018 Jan 8;9(1):97. doi: 10.1038/s41467-017-02570-5.
2
Splicing of yeast aI5beta group I intron requires SUV3 to recycle MRS1 via mitochondrial degradosome-promoted decay of excised intron ribonucleoprotein (RNP).酵母 aI5beta 组 I 内含子的剪接需要 SUV3 通过线粒体降解体促进切除内含子核糖核蛋白(RNP)的降解来回收 MRS1。
J Biol Chem. 2010 Mar 19;285(12):8585-94. doi: 10.1074/jbc.M109.090761. Epub 2010 Jan 11.
3
Role of SUV3 helicase in maintaining mitochondrial homeostasis in human cells.
SUV3解旋酶在维持人类细胞线粒体稳态中的作用。
J Biol Chem. 2008 Oct 3;283(40):27064-73. doi: 10.1074/jbc.M802991200. Epub 2008 Aug 4.
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Dead-box proteins: a family affair--active and passive players in RNP-remodeling.DEAD-box蛋白:家族事务——核糖核蛋白重塑中的主动和被动参与者
Nucleic Acids Res. 2006;34(15):4168-80. doi: 10.1093/nar/gkl468. Epub 2006 Aug 26.
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Balance between transcription and RNA degradation is vital for Saccharomyces cerevisiae mitochondria: reduced transcription rescues the phenotype of deficient RNA degradation.转录与RNA降解之间的平衡对酿酒酵母线粒体至关重要:转录减少可挽救RNA降解缺陷的表型。
Mol Biol Cell. 2006 Mar;17(3):1184-93. doi: 10.1091/mbc.e05-08-0796. Epub 2005 Dec 21.
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Suppressor analysis of mutations in the 5'-untranslated region of COB mRNA identifies components of general pathways for mitochondrial mRNA processing and decay in Saccharomyces cerevisiae.对酿酒酵母中COB mRNA 5'非翻译区突变的抑制子分析确定了线粒体mRNA加工和降解一般途径的组成成分。
Genetics. 1999 Apr;151(4):1315-25. doi: 10.1093/genetics/151.4.1315.
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Posttranscriptional control of gene expression in yeast.酵母中基因表达的转录后调控
Microbiol Mol Biol Rev. 1998 Dec;62(4):1492-553. doi: 10.1128/MMBR.62.4.1492-1553.1998.
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Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly.Dbp7p是一种来自酿酒酵母的假定的ATP依赖性RNA解旋酶,是60S核糖体亚基组装所必需的。
RNA. 1998 May;4(5):566-81. doi: 10.1017/s1355838298980190.
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Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae.Dbp6p是酿酒酵母中60S核糖体亚基组装所必需的一种假定的ATP依赖性RNA解旋酶。
Mol Cell Biol. 1998 Apr;18(4):1855-65. doi: 10.1128/MCB.18.4.1855.
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Dhh1p, a putative RNA helicase, associates with the general transcription factors Pop2p and Ccr4p from Saccharomyces cerevisiae.Dhh1p是一种假定的RNA解旋酶,它与酿酒酵母中的通用转录因子Pop2p和Ccr4p相关联。
Genetics. 1998 Feb;148(2):571-9. doi: 10.1093/genetics/148.2.571.