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Dbp6p是酿酒酵母中60S核糖体亚基组装所必需的一种假定的ATP依赖性RNA解旋酶。

Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae.

作者信息

Kressler D, de la Cruz J, Rojo M, Linder P

机构信息

Département de Biochimie Médicale, Centre Médical Universitaire, Université de Genève, Geneva, Switzerland.

出版信息

Mol Cell Biol. 1998 Apr;18(4):1855-65. doi: 10.1128/MCB.18.4.1855.

DOI:10.1128/MCB.18.4.1855
PMID:9528757
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC121415/
Abstract

A previously uncharacterized Saccharomyces cerevisiae open reading frame, YNR038W, was analyzed in the context of the European Functional Analysis Network. YNR038W encodes a putative ATP-dependent RNA helicase of the DEAD-box protein family and was therefore named DBP6 (DEAD-box protein 6). Dbp6p is essential for cell viability. In vivo depletion of Dbp6p results in a deficit in 60S ribosomal subunits and the appearance of half-mer polysomes. Pulse-chase labeling of pre-rRNA and steady-state analysis of pre-rRNA and mature rRNA by Northern hybridization and primer extension show that Dbp6p depletion leads to decreased production of the 27S and 7S precursors, resulting in a depletion of the mature 25S and 5.8S rRNAs. Furthermore, hemagglutinin epitope-tagged Dbp6p is detected exclusively within the nucleolus. We propose that Dbp6p is required for the proper assembly of preribosomal particles during the biogenesis of 60S ribosomal subunits, probably by acting as an rRNA helicase.

摘要

在欧洲功能分析网络的背景下,对酿酒酵母中一个以前未被鉴定的开放阅读框YNR038W进行了分析。YNR038W编码一种假定的DEAD-box蛋白家族的ATP依赖性RNA解旋酶,因此被命名为DBP6(DEAD-box蛋白6)。Dbp6p对细胞活力至关重要。体内Dbp6p的缺失会导致60S核糖体亚基的缺乏以及半聚核糖体的出现。通过Northern杂交和引物延伸对前体rRNA进行脉冲追踪标记以及对前体rRNA和成熟rRNA进行稳态分析表明,Dbp6p的缺失会导致27S和7S前体的产生减少,从而导致成熟的25S和5.8S rRNA的缺乏。此外,仅在核仁中检测到血凝素表位标记的Dbp6p。我们提出,Dbp6p可能通过作为rRNA解旋酶,在60S核糖体亚基的生物合成过程中,对前核糖体颗粒的正确组装是必需的。

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RNA helicases: modulators of RNA structure.RNA解旋酶:RNA结构的调节因子
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Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly.Dbp7p是一种来自酿酒酵母的假定的ATP依赖性RNA解旋酶,是60S核糖体亚基组装所必需的。
RNA. 1998 May;4(5):566-81. doi: 10.1017/s1355838298980190.
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Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae.Dob1p(Mtr4p)是一种推测的ATP依赖性RNA解旋酶,酿酒酵母中5.8S rRNA的3'末端形成需要该酶。
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The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases.外泌体:一种保守的真核生物RNA加工复合体,含有多种3'→5'外切核糖核酸酶。
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Fal1p is an essential DEAD-box protein involved in 40S-ribosomal-subunit biogenesis in Saccharomyces cerevisiae.Fal1p是一种参与酿酒酵母40S核糖体亚基生物合成的必需DEAD盒蛋白。
Mol Cell Biol. 1997 Dec;17(12):7283-94. doi: 10.1128/MCB.17.12.7283.
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Saccharomyces cerevisiae Nip7p is required for efficient 60S ribosome subunit biogenesis.酿酒酵母Nip7p是高效60S核糖体亚基生物合成所必需的。
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The rRNA-processing function of the yeast U14 small nucleolar RNA can be rescued by a conserved RNA helicase-like protein.酵母U14小核仁RNA的rRNA加工功能可被一种保守的类RNA解旋酶蛋白拯救。
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Function and synthesis of small nucleolar RNAs.小核仁RNA的功能与合成
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Rok1p is a putative RNA helicase required for rRNA processing.Rok1p是一种rRNA加工所需的假定RNA解旋酶。
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