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利用圆二色性和动态荧光偏振研究铜绿假单胞菌蓝铜蛋白的结构与流动性

Probing the structure and mobility of Pseudomonas aeruginosa azurin by circular dichroism and dynamic fluorescence anisotropy.

作者信息

Mei G, Gilardi G, Venanzi M, Rosato N, Canters G W, Agró A F

机构信息

Dipartimento di Medicina Sperimentale e Scienze Biochimiche, Universitá di Roma Tor Vergata, Italy.

出版信息

Protein Sci. 1996 Nov;5(11):2248-54. doi: 10.1002/pro.5560051111.

Abstract

The UV dynamic fluorescence and CD of several Pseudomonas aeruginosa azurins bearing single amino acid mutation have been studied. Two classes of mutants were examined. In the first class, two hydrophobic residues in the core of the protein, Ile 7 and Phe 110, nearest to the azurin single tryptophan Trp 48, were substituted by a serine (mutants 17S and F110S). In the second class, two residues in the outer sphere of the copper ligand field were changed, obtaining the following mutants: M44K, H35F, H35L, and H35Q. All these proteins showed two fluorescence lifetimes in the copper-containing form, but only one in the copper-free form. The lifetime of the latter derivatives was different from either those of the metal-bound samples, definitely ruling out the presence of apo-like species in the holo protein. Copper-free 17S and F110S showed a more complex fluorescence decay profile requiring a distribution of lifetimes rather than a single lifetime. Holo F110S was also better fitted, in the limit of confidence, with two distributions rather than a pair of lifetimes. Time-resolved anisotropy of these two mutants as well as of wild-type (wt) protein showed two components (rotational times for wt < or = 200 ps and 7 ns, respectively). These components were not affected significantly by copper removal in the case of wt protein. Instead, the short rotational component of the mutants dropped dramatically to values near zero, indicating a much greater mobility of the tryptophanyl residue in the mutant apo azurins. These data were supported by CD measurements showing a small effect of the copper presence in the region below 250 nm, i.e., in the secondary structure, but almost a collapse of the aromatic asymmetry at 270-295 nm related to a relaxation of the structural constraint around the tryptophan. Altogether these data show that copper does not play a structural role in wt azurin, whereas it is crucial in the stabilization of 17S and F110S mutants. Furthermore, although the metal site geometry is rigidly kept in wt apo-azurin, it regains the native form only in the presence of the metal in the "core" mutants. This finding is important for the theory of entatic states in metalloproteins (Williams RJP, 1995, Eur J Biochem 234:363-381).

摘要

对几种带有单个氨基酸突变的铜绿假单胞菌天青蛋白的紫外动态荧光和圆二色性进行了研究。研究了两类突变体。在第一类中,蛋白质核心区域中最靠近天青蛋白单个色氨酸Trp 48的两个疏水残基Ile 7和Phe 110被丝氨酸取代(突变体17S和F110S)。在第二类中,铜配体场外部区域的两个残基发生了变化,得到了以下突变体:M44K、H35F、H35L和H35Q。所有这些蛋白质在含铜形式下显示出两个荧光寿命,但在无铜形式下仅显示一个荧光寿命。后者衍生物的寿命与金属结合样品的寿命均不同,明确排除了全蛋白中存在脱辅基样物种的可能性。无铜的17S和F110S显示出更复杂的荧光衰减曲线,需要寿命分布而非单一寿命。在置信度范围内,全蛋白F110S也更好地拟合为两个分布而非一对寿命。这两个突变体以及野生型(wt)蛋白的时间分辨各向异性显示出两个成分(wt的旋转时间分别≤200 ps和7 ns)。对于wt蛋白,这些成分不受铜去除的显著影响。相反,突变体的短旋转成分急剧下降至接近零的值,表明突变体脱辅基天青蛋白中色氨酸残基的流动性更大。圆二色性测量结果支持了这些数据,结果表明在250 nm以下区域,即二级结构区域,铜的存在影响较小,但在270 - 295 nm处与色氨酸周围结构约束的松弛相关的芳香不对称性几乎完全消失。总之,这些数据表明铜在wt天青蛋白中不发挥结构作用,而在17S和F110S突变体的稳定中至关重要。此外,尽管金属位点几何结构在wt脱辅基天青蛋白中严格保持,但仅在“核心”突变体中存在金属时才恢复天然形式。这一发现对于金属蛋白的态态理论很重要(Williams RJP,1995,Eur J Biochem 234:363 - 38) 。 (注:最后括号内文献标注中的期刊卷号有误,应为Eur J Biochem 234:363-381 ,译文按原文保留了错误标注)

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