Roberts G C, Gooding C, Smith C W
Department of Biochemistry, University of Cambridge, UK.
EMBO J. 1996 Nov 15;15(22):6301-10.
Alternative splicing is a common mechanism for regulating gene expression in different cell types. In order to understand this important process, the trans-acting factors that enforce the choice of particular splicing pathways in different environments must be identified. We have used the rat alpha-tropomyosin gene as a model system of tissue-specific alternative splicing. Exon 3 of alpha-tropomyosin is specifically inhibited in smooth muscle cells allowing the alternative inclusion of exon 2. We have used a novel gene transfer and selection strategy to detect a gene whose expression in fibroblasts is sufficient to switch them to smooth muscle-specific splicing of alpha-tropomyosin and also alpha-actinin. Extracts from the regulating fibroblasts contain an apparently novel 55 kDa protein which binds to RNA elements required for regulation of tropomyosin splicing. This protein is not detected in extracts of non-regulating cells and is therefore a strong candidate cell-specific splicing regulator. These experiments advance our understanding of smooth muscle splicing regulation as well as establishing a means for direct cloning of tissue-specific splicing regulators which have so far been refractory to biochemical analysis.
可变剪接是调节不同细胞类型中基因表达的常见机制。为了理解这一重要过程,必须确定在不同环境中强制选择特定剪接途径的反式作用因子。我们使用大鼠α-原肌球蛋白基因作为组织特异性可变剪接的模型系统。α-原肌球蛋白的外显子3在平滑肌细胞中被特异性抑制,从而允许外显子2的选择性包含。我们使用了一种新颖的基因转移和筛选策略来检测一种基因,其在成纤维细胞中的表达足以使其转变为α-原肌球蛋白以及α-辅肌动蛋白的平滑肌特异性剪接。调节性成纤维细胞的提取物含有一种明显新颖的55 kDa蛋白质,它与原肌球蛋白剪接调节所需的RNA元件结合。在非调节性细胞的提取物中未检测到这种蛋白质,因此它是细胞特异性剪接调节因子的确切候选者。这些实验推进了我们对平滑肌剪接调节的理解,同时也建立了一种直接克隆组织特异性剪接调节因子的方法,而这些调节因子迄今为止一直难以进行生化分析。