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甲硫氨酰 - tRNA合成酶对酵母tRNA(Met)的识别需要来自一级、二级和三级结构的决定因素:综述

Yeast tRNA(Met) recognition by methionyl-tRNA synthetase requires determinants from the primary, secondary and tertiary structure: a review.

作者信息

Senger B, Fasiolo F

机构信息

CNRS, UPR 9002, Structure des Macromolécules Biologiques et Mécanismes de Reconnaissance, Institut de Biologie Moléculaire et Cellulaire, Strasbourg, France.

出版信息

Biochimie. 1996;78(7):597-604. doi: 10.1016/s0300-9084(96)80006-x.

DOI:10.1016/s0300-9084(96)80006-x
PMID:8955903
Abstract

The primordial role of the CAU anticodon in methionine identity of the tRNA has been established by others nearly a decade ago in Escherichia coli and yeast tRNA(Met). We show here that the CAU triplet alone is unable to confer methionine acceptance to a tRNA. This requires the contribution of the discriminatory base A73 and the non-anticodon bases of the anticodon loop. To better understand the functional communication between the anticodon and the active site, we analysed the binding and aminoacylation of tRNA(Met) based anticodon and acceptor-stem minihelices and of tRNA(Met) chimeras where the central core region of yeast tRNA(Met) is replaced by that of unusual mitochondrial forms lacking either a D-stem or a T-stem. These studies suggest that the high selectivity of the anticodon bases in tRNA(Met) implies the L-conformation of the tRNA and the presence of a D-stem. The importance of a L-structure for recognition of tRNA(Met) was also deduced from mutations of tertiary interactions known to play a general role in tRNA(Met) folding.

摘要

近十年前,其他人已在大肠杆菌和酵母tRNA(Met)中证实了CAU反密码子在tRNA甲硫氨酸识别中的原始作用。我们在此表明,仅CAU三联体无法赋予tRNA甲硫氨酸接纳能力。这需要鉴别碱基A73和反密码子环的非反密码子碱基的共同作用。为了更好地理解反密码子与活性位点之间的功能联系,我们分析了基于tRNA(Met)反密码子和受体茎的小螺旋以及tRNA(Met)嵌合体(其中酵母tRNA(Met)的中央核心区域被缺乏D茎或T茎的异常线粒体形式的相应区域所取代)的结合和氨酰化情况。这些研究表明tRNA(Met)中反密码子碱基的高选择性意味着tRNA的L构象以及D茎的存在。tRNA(Met)折叠中起普遍作用的三级相互作用的突变也推断出L结构对tRNA(Met)识别的重要性。

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Yeast tRNA(Met) recognition by methionyl-tRNA synthetase requires determinants from the primary, secondary and tertiary structure: a review.甲硫氨酰 - tRNA合成酶对酵母tRNA(Met)的识别需要来自一级、二级和三级结构的决定因素:综述
Biochimie. 1996;78(7):597-604. doi: 10.1016/s0300-9084(96)80006-x.
2
The presence of a D-stem but not a T-stem is essential for triggering aminoacylation upon anticodon binding in yeast methionine tRNA.在酵母甲硫氨酸tRNA中,反密码子结合时触发氨酰化作用需要D茎的存在,但不需要T茎的存在。
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Binding of the yeast tRNA(Met) anticodon by the cognate methionyl-tRNA synthetase involves at least two independent peptide regions.同源甲硫氨酰 - tRNA合成酶与酵母tRNA(Met)反密码子的结合涉及至少两个独立的肽区域。
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The anticodon triplet is not sufficient to confer methionine acceptance to a transfer RNA.反密码子三联体不足以使转运RNA接受甲硫氨酸。
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Critical role of the acceptor stem of tRNAs(Met) in their aminoacylation by Escherichia coli methionyl-tRNA synthetase.tRNA(Met)的受体茎在其被大肠杆菌甲硫氨酰-tRNA合成酶氨酰化过程中的关键作用。
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Two acidic residues of Escherichia coli methionyl-tRNA synthetase act as negative discriminants towards the binding of non-cognate tRNA anticodons.大肠杆菌甲硫氨酰 - tRNA合成酶的两个酸性残基对非同源tRNA反密码子的结合起到负向判别作用。
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Involvement of the size and sequence of the anticodon loop in tRNA recognition by mammalian and E. coli methionyl-tRNA synthetases.反密码子环的大小和序列在哺乳动物和大肠杆菌甲硫氨酰 - tRNA合成酶识别tRNA中的作用。
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Binding of the anticodon domain of tRNA(fMet) to Escherichia coli methionyl-tRNA synthetase.tRNA(fMet)的反密码子结构域与大肠杆菌甲硫氨酰-tRNA合成酶的结合。
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C-terminal peptide appendix in a class I tRNA synthetase needed for acceptor-helix contacts and microhelix aminoacylation.I类tRNA合成酶中用于受体螺旋接触和微螺旋氨基酰化的C末端肽附属物。
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